Pairwise Alignments

Query, 353 a.a., Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 358 a.a., ABC transporter for Lactose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  251 bits (641), Expect = 2e-71
 Identities = 150/356 (42%), Positives = 210/356 (58%), Gaps = 17/356 (4%)

Query: 1   MSKLELNNVRKQYGALAVVDDLSLQLRKGELVTLLGPSGCGKTTTLRMIAGFIELSGGSI 60
           MS+L+L++VRK YG L V+  + L ++ GE V  +GPSGCGK+T LRMIAG  E+S G +
Sbjct: 1   MSELQLSDVRKSYGGLEVIKGVDLDIKSGEFVVFVGPSGCGKSTLLRMIAGLEEISSGDL 60

Query: 61  AVDGRQISGAGRTVPPEHRGMSMIFQSYAIWPNMTVAENVAFGLNVRRVPGEESKRRVEE 120
            +D  +++     V P  RG++M+FQSYA++P+MTV EN+ F L    VP  E ++RV E
Sbjct: 61  TIDDVRMND----VDPSKRGIAMVFQSYALYPHMTVRENMGFALRFAGVPRAEIEKRVNE 116

Query: 121 MLDVVKLGALAQRYPAELSGGQQQRVALARAMVVRPEVLLLDEPLSNLDANLREEMAGEI 180
              +++LGAL  R P +LSGGQ+QRVA+ RA+V  P++ L DEPLSNLDA LR  M  EI
Sbjct: 117 AAHILELGALLDRKPKQLSGGQRQRVAIGRAIVRHPKIFLFDEPLSNLDAELRVHMRIEI 176

Query: 181 RRLHDEFNFTTVYVTHDQTEAMTISDRIAVLNLGKLEQIDTPWNLYNRPRTRFVAGFIG- 239
            RLH +   T VYVTHDQ EAMT++D+I V+  G +EQ+ +P +LY+ P   FVAGFIG 
Sbjct: 177 ARLHKQLATTIVYVTHDQVEAMTLADKIVVMRAGVVEQVGSPLDLYDDPANLFVAGFIGS 236

Query: 240 -QTNLVEGHVR----DGQIRLRGL-EGVLPMGGQAAAASADMRISIRPQSLFLGPQGNGA 293
            + N ++G +         RL    +  +P+  QAAA +A + I IRP+       G  A
Sbjct: 237 PKMNFLKGVIEIDEDQAYARLPDYGDAKIPVTLQAAAGTA-VTIGIRPE--HFDEAGPAA 293

Query: 294 LPMGAVSVVARTYLGEYWDYLVRPTAGGDELKVHAPPSSVLDVGHESLLSIDPAGV 349
           L +   ++    +LG       R    G+ + V       L  G       DP  V
Sbjct: 294 LDL---AIDMLEHLGGETFAYARHHGNGELIVVETKNGRGLKTGDRLTARFDPVSV 346