Pairwise Alignments

Query, 339 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

Subject, 331 a.a., TRAP-type large permease component from Sinorhizobium meliloti 1021

 Score = 94.4 bits (233), Expect = 4e-24
 Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 7/285 (2%)

Query: 3   SLTRRRALRTLSALPAAGIVTALPRIARAAEF-SYKYGNNLPLTHPLNIRAQEAAERIAK 61
           + +RR  L  ++A   A +  A P + RA E  + + G   P  HP N  A +  E +  
Sbjct: 2   TFSRRTFLGGVAA--GAALSLATPSLVRAQETRTLRLGIVTPPGHPWNNAALKVGEALKA 59

Query: 62  ETKGRVEIKIFPNNQLGGDTDMLAQVRSGGIEFFTPSALVIATLVP-VAAINAVGFAFND 120
           ET GR+ I +FP  QLG +  ML Q++SG ++        + + +P VAAINA      D
Sbjct: 60  ETNGRLSISVFPAGQLGNEAAMLQQMQSGALDLGWIMTAELGSRIPAVAAINAPWVV--D 117

Query: 121 YTQVWAAMDGKLGAHVRGAIAKARLYAFEKMWDNGFRQTTSSKAAVATAKDMDGLKIRVP 180
            T   A +  +  A     +  A        W     +   S   +A   D++G+K+R+ 
Sbjct: 118 STAKVAKLVREPVAMKLLDVLPAETGTVGLAWGITTMRVVFSAKEIAGLDDINGMKLRIN 177

Query: 181 VSPLSISMFKGLGAAPASLQFSEVYSALQTKIVDAQENPLPIIQVAKLFEVQKFCSLTNH 240
            +P     ++ LGAAP  +    V+ A+    VD  E  L      +  +V K     N 
Sbjct: 178 TTPAYRDFYQLLGAAPTPIPTPAVFDAMSNGQVDGLEADLDFSWNQRFDKVSKTMLKMNA 237

Query: 241 IWDGYWFIANGRAWEALPEDLKTIVARAINDAGMQQREDIRKLNE 285
           I+     +A+GR W+ LPE  + I+AR +  + + ++ D    NE
Sbjct: 238 IFMPCVALASGRVWQTLPEADREIIAR-LTKSALDEQIDATVANE 281