Pairwise Alignments
Query, 339 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45
Subject, 331 a.a., TRAP-type large permease component from Sinorhizobium meliloti 1021
Score = 94.4 bits (233), Expect = 4e-24
Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 7/285 (2%)
Query: 3 SLTRRRALRTLSALPAAGIVTALPRIARAAEF-SYKYGNNLPLTHPLNIRAQEAAERIAK 61
+ +RR L ++A A + A P + RA E + + G P HP N A + E +
Sbjct: 2 TFSRRTFLGGVAA--GAALSLATPSLVRAQETRTLRLGIVTPPGHPWNNAALKVGEALKA 59
Query: 62 ETKGRVEIKIFPNNQLGGDTDMLAQVRSGGIEFFTPSALVIATLVP-VAAINAVGFAFND 120
ET GR+ I +FP QLG + ML Q++SG ++ + + +P VAAINA D
Sbjct: 60 ETNGRLSISVFPAGQLGNEAAMLQQMQSGALDLGWIMTAELGSRIPAVAAINAPWVV--D 117
Query: 121 YTQVWAAMDGKLGAHVRGAIAKARLYAFEKMWDNGFRQTTSSKAAVATAKDMDGLKIRVP 180
T A + + A + A W + S +A D++G+K+R+
Sbjct: 118 STAKVAKLVREPVAMKLLDVLPAETGTVGLAWGITTMRVVFSAKEIAGLDDINGMKLRIN 177
Query: 181 VSPLSISMFKGLGAAPASLQFSEVYSALQTKIVDAQENPLPIIQVAKLFEVQKFCSLTNH 240
+P ++ LGAAP + V+ A+ VD E L + +V K N
Sbjct: 178 TTPAYRDFYQLLGAAPTPIPTPAVFDAMSNGQVDGLEADLDFSWNQRFDKVSKTMLKMNA 237
Query: 241 IWDGYWFIANGRAWEALPEDLKTIVARAINDAGMQQREDIRKLNE 285
I+ +A+GR W+ LPE + I+AR + + + ++ D NE
Sbjct: 238 IFMPCVALASGRVWQTLPEADREIIAR-LTKSALDEQIDATVANE 281