Pairwise Alignments

Query, 339 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

Subject, 338 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  148 bits (373), Expect = 2e-40
 Identities = 89/299 (29%), Positives = 164/299 (54%), Gaps = 3/299 (1%)

Query: 15  ALPAAGIVTALPRIARAAEFSYKYGNNLPLTHPLNIRAQEAAERIAKETKGRVEIKIFPN 74
           A+P A ++TA P +A   + + K+ +     HP     ++ AE + +++ G++E+K+FP 
Sbjct: 13  AVPLA-LMTAGPALAEIRDQTVKFASANNKGHPQVTGMEKFAELVKEKSGGKIEVKLFPG 71

Query: 75  NQLGGDTDMLAQVRSGGIEFFTPSALVIATLVPVAAINAVGFAFNDYTQVWAAMDGKLGA 134
             LGGD   ++ ++ G IE    +A ++A+ V       + F F+   +    MDG  G 
Sbjct: 72  GTLGGDVQTVSALQGGVIEMTVLNAGILASNVKEFGAVDLPFLFDSGEEADKVMDGPFGT 131

Query: 135 HVRGAIAKARLYAFEKMWDNGFRQTTSSKAAVATAKDMDGLKIRVPVSPLSISMFKGLGA 194
            +   +    L      W+ GFR  T+++  V   +D+ GLKIR   SP+ + +F  LGA
Sbjct: 132 SLMERLPATGLVGVA-YWELGFRNLTNNRHPVTKLEDIKGLKIRTIQSPIPVELFNALGA 190

Query: 195 APASLQFSEVYSALQTKIVDAQENPLPIIQVAKLFEVQKFCSLTNHIWDGYWFIANGRAW 254
               L ++E+Y+AL+T  VD QENP   I  AK +EVQK+ +LT H ++    + + + W
Sbjct: 191 NAVPLPYTELYTALETGTVDGQENPSANIINAKFYEVQKYMTLTRHQYNPQIVLVSKKFW 250

Query: 255 EALPEDLKTIVARAINDAGMQQREDIRKLNESVVGDLQAKGLSINRPAAESFRAKLRES 313
           + L ++ KT++ +A  +A   QR+  R+ + + + +++  G+ ++  +AE  + KLR++
Sbjct: 251 DGLNDEEKTVLQQAAVEARDFQRKVSREQDAAALEEIRKTGMEVSELSAEETQ-KLRDA 308