Pairwise Alignments

Query, 629 a.a., Predicted gluconate TRAP family transporter, DctM subunit from Variovorax sp. SCN45

Subject, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  177 bits (448), Expect = 1e-48
 Identities = 117/436 (26%), Positives = 203/436 (46%), Gaps = 21/436 (4%)

Query: 209 VIFFVVIVAATVLSGVPIAFSFALATFGYLALTTRTPLLVMVGRLDEGMS-HLILLAVPL 267
           V    ++V   ++ GVPIA S  L++  +L   +   L  +   L    + H  LLA+P 
Sbjct: 3   VALLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIPF 62

Query: 268 FIFLGALIEMTGMARAMIQFLASLLGHVRGGLSYVLIGAMYLVSGISGSKIADMAAIAPV 327
           FI     +   G+A+ +I+F  +++G  RGGL+   + A  + + +SGS  A + AI  +
Sbjct: 63  FILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSI 122

Query: 328 LFPEMTKRGAKPGDLVALLSATGAQTETIPPSIVLITIGSVTGVSIAALFTGGLLPAVVL 387
           +   M K G        ++   G     IPPSIV++   + T VS+  +F GG++P ++ 
Sbjct: 123 VIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGLLA 182

Query: 388 GAALCAVVWWRYRREDLSGVQRYSKREIGKLLLVALPAVLLPFVIRAAVVEGVATATEVS 447
           G  L   ++   R ++L        +E  K    A   +LL  +I   +  G+ T TE +
Sbjct: 183 GLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTEAA 242

Query: 448 TIGIVYAAVVGLVVYRQF----DWRRLKPMLV----------------DTASLSGAIIFI 487
            +  VY+  +   +YR      D    KP+LV                D   L+  ++FI
Sbjct: 243 AVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLMFI 302

Query: 488 VGCATAMAWGLTQSGFSQDLARVMGTLPGGAYGFLAVSIVAFIVLGSVLEGIPAIVLFGP 547
           +  A  +   LT+    Q +   M +   G   FL V  +  +V G  +E    +V+  P
Sbjct: 303 IANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIVAP 362

Query: 548 LLFPIAKAAGVHEVHYAMVVIFSMGIGLFAPPFGVGYYGACAVSKVNPDEGIRHIWGYIG 607
           L+FPIA A G+  +H  ++++ +M IG+  PP G+  +    V+K++    ++    ++G
Sbjct: 363 LVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPWVG 422

Query: 608 AMLVGLVIVALFPWFS 623
            M + L+IV   PW S
Sbjct: 423 VMFLFLIIVTYVPWVS 438