Pairwise Alignments

Query, 629 a.a., Predicted gluconate TRAP family transporter, DctM subunit from Variovorax sp. SCN45

Subject, 437 a.a., large C4-dicarboxylate uptake permease, DedA family protein from Sinorhizobium meliloti 1021

 Score =  185 bits (469), Expect = 4e-51
 Identities = 117/414 (28%), Positives = 201/414 (48%), Gaps = 3/414 (0%)

Query: 214 VIVAATVLSGVPIAFSFALATFGYLALTT-RTPLLVMVGRLDEGMSHLILLAVPLFIFLG 272
           ++V    L   PI ++ A+  F +  +     PL      + EG   + LLA+PLF+  G
Sbjct: 11  LLVVVLFLLSTPITWAMAIGAFAFFLINMDMIPLANFAQEMAEGSQSVSLLALPLFVLAG 70

Query: 273 ALIEMTGMARAMIQFLASLLGHVRGGLSYVLIGAMYLVSGISGSKIADMAAIAPVLFPEM 332
            ++  +G+ R ++     L+GH+ G L+ +      L+ G++ S  AD A +A  L  EM
Sbjct: 71  CIMNASGITRRLLALADVLVGHMTGALAQMCTVLGTLLGGLTASANADAAMLAKTLGVEM 130

Query: 333 TKRGAKPGDLVALLSATGAQTETIPPSIVLITIGSVTGVSIAALFTGGLLPAVVLGAALC 392
           ++RG        + S+    T  IPPSI LI  G +   SI  LF  G++P +VL   L 
Sbjct: 131 SQRGYSRAFAAVITSSAAIITSLIPPSIGLIVYGFLAETSIGRLFAAGVIPGLVLATGLM 190

Query: 393 AVVWWRYRREDLSGV--QRYSKREIGKLLLVALPAVLLPFVIRAAVVEGVATATEVSTIG 450
              ++  R+     +  +R ++ E  + L+  L A+ +P VI A    G+ T TE   + 
Sbjct: 191 VTTYFIARKRGYKPLRKERATRAEGVRALIDGLWALSIPVVIFAGTRYGLFTTTEAGAVV 250

Query: 451 IVYAAVVGLVVYRQFDWRRLKPMLVDTASLSGAIIFIVGCATAMAWGLTQSGFSQDLARV 510
           +VY   V +  YR+F +R++  +L +    S  ++ ++  A A  + L      Q ++  
Sbjct: 251 VVYVLFVAVFGYREFTFRQIPEVLAEAVRDSAVVMIMICAAAAFGFYLAWEQVPQAMSGW 310

Query: 511 MGTLPGGAYGFLAVSIVAFIVLGSVLEGIPAIVLFGPLLFPIAKAAGVHEVHYAMVVIFS 570
           +G         L +  V  IV+G+ +EG  A+++  P+L PI    G+  VH+ +V I +
Sbjct: 311 LGEATDNPLLMLLLINVLLIVIGTAIEGSAALIILTPMLIPIIDGVGIDRVHFGVVFITN 370

Query: 571 MGIGLFAPPFGVGYYGACAVSKVNPDEGIRHIWGYIGAMLVGLVIVALFPWFSI 624
           + I    PP G   Y +  V KV      R +  Y+  M+V LV++++FP  S+
Sbjct: 371 LTIAGITPPVGGLMYISSMVLKVPMMAYAREVLPYLAMMMVILVMLSMFPQLSL 424