Pairwise Alignments

Query, 466 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 458 a.a., Niacin transporter NiaP from Pseudomonas fluorescens FW300-N2E2

 Score =  143 bits (361), Expect = 1e-38
 Identities = 117/461 (25%), Positives = 206/461 (44%), Gaps = 28/461 (6%)

Query: 19  GDTSASLYDRDTLTPRQKFVVGVSAFAQMVDFLDFFLISFVITYIVGPWQLSVGQTTIIL 78
           G ++A   +R  ++   + +  + A A   D +D  +++F++  I   + LS  Q  ++ 
Sbjct: 5   GYSAAERLERLPISGYHRVIFIIIALAFFFDSMDLAMMTFLLGSIKAEFGLSTAQAGLLA 64

Query: 79  LSAGIGASFGSFICGAIADRVGRRPVFLCTIALFTLCTGALALIPDGAWIWLTVLRFFVG 138
            S+  G   G+ + G +ADR GR+PVF  +I L+ + +   +   D     LT+ R  +G
Sbjct: 65  SSSFFGMVVGASLSGMLADRFGRKPVFQWSIVLWGIASYLCSTAQDIET--LTLFRILLG 122

Query: 139 FGATGMYSTNIPLLQEFMPTKKRSFATGLVASFIPVGVMLGSAIVFLFGTAVGWRGLFGI 198
            G    +     +L E +P K+R     L+  F P+G +    + +     VGWR +F +
Sbjct: 123 IGMGMEFPIAQSMLSELIPAKRRGRYIALMDGFWPLGFVAAGVLSYFLLPVVGWRDIFLV 182

Query: 199 GFALGALLLAVGWRVPESPLWFISKDERARARRSLAWALDESEDRVVVPAKAQDQPAD-- 256
                  +LA+ + +PESP W     E+A         L   ED+V      Q+ P    
Sbjct: 183 LAVPAVFVLAIRFFIPESPRWL----EQAGRGDEADAVLKRIEDKVRTSLGYQNLPEPIR 238

Query: 257 ----RVTVRELFQ---------YPRKVIVSWVSILGSQVAYYGLTLWAPALLVAILHTTP 303
                 T    F          Y ++ ++ W     + + +YGLT W  ALL        
Sbjct: 239 LPRVESTPGNFFSALAQIWSPLYRQRTMMIWSVWFFALLGFYGLTSWLSALLQQSGFAV- 297

Query: 304 SHAAFLLIFCNLADMGARLIFAYVSERAGRRLIGILQGFVGAALLVATSLTANAFIGGVS 363
           + + +  +  +L  +   L+ A++ ER GR+ + ++   +G  ++      +  F G V 
Sbjct: 298 TQSVYYTVLISLGGIPGFLMAAWLVERWGRKPVCVIT-LLGGGVMAFLYGQSAVFGGNVG 356

Query: 364 VFWLLLMATYFFVSGGFSVTVPYVAEIWPSRLRATGLGSAYGVGSLGKIVGPLGLGLVLG 423
           +     +   FF+ G ++V   Y  E++P+  RATG G A  VG +G ++GPL  GLV  
Sbjct: 357 LLIGTGLLMQFFLFGMWAVLYTYTPELYPTSARATGSGFASAVGRIGSLLGPLVTGLVFP 416

Query: 424 TSKVTVDAVFPAFCYLAAFLLLTGIVFLWLAEETRGRRFED 464
            +         A C+  A     G+V+L+   ETRG+  E+
Sbjct: 417 ITGQGGVFALGALCFAVA----AGVVWLF-GMETRGKTLEE 452