Pairwise Alignments

Query, 384 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 378 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score =  112 bits (280), Expect = 2e-29
 Identities = 111/386 (28%), Positives = 180/386 (46%), Gaps = 27/386 (6%)

Query: 2   MEKLTRRA--LAVLAICSLGAMSPAFAQGKPIKIGAVVSATGPASFLGDPQQKTLESYVQ 59
           M K + +A  +A L    +GA S   AQ   IKIG V+  +G  S  G P QK L+  +Q
Sbjct: 1   MNKFSGKASLMATLVAAWVGASS---AQAAEIKIGVVLPLSGALSGYGQPSQKGLD-IIQ 56

Query: 60  KINAGGGVLGRKLELVLYDDASDANKANAFARRLIIQDEVDAILGASTTGSTMAMVPQVE 119
            I       G  ++L++ DD SD  +A    +RL+  D+VDA++G  T+ +T+AM    +
Sbjct: 57  SITPTLKN-GDTVKLIVIDDKSDKVEAANAMQRLVSSDKVDAVIGEVTSSNTLAMTKIAD 115

Query: 120 AAKIPNISLAAASVIVEPVRPWVFKMPHSDR----MAAQKVLEEMK-KRGFMQFALLSD- 173
            +K P +S  A +  V    P+V ++  SD     + A     ++K K   + F   +D 
Sbjct: 116 DSKTPLVSSTATNDRVTRNHPYVSRVCFSDSFQGVVGANLASRDLKAKTAAIVFDSSNDY 175

Query: 174 TGGFGKSGRTETLKMAGALGMKVVEDQQYGEKDTDMTPQLTKVKSSPAQAILVFGTGQAP 233
           + G  K+ RT+ LK  G + ++V    Q      D   QL  VK+     I +       
Sbjct: 176 SVGLAKAFRTQFLKNGGTIPIEV----QAPGGSKDFKAQLASVKAKNVDMIYMPIYYTEG 231

Query: 234 AIIARNYQQLGVQQPLYTTHGQASTEFIRIAGKAAEGIRMPSPALLIAKALPASDPQRDV 293
           A+IA   +QLG+ +P+    G A+ +     GK A    M +         P +  Q   
Sbjct: 232 ALIAVQAKQLGLSKPVVGGDGLAADQVFFDVGKDAVNGYMTTDYY-----SPNAKEQTPA 286

Query: 294 SAEYVKAYEGQFKSDVSTFGGYAHDALLILVDAIKRAGGT-DKDKVRAALEQTKGFVGVS 352
              ++KA+E +++    T+G  A DA  ++++A+ +     D+  V   +  TK F GV+
Sbjct: 287 GEVFIKAWEAKYQQPTHTWGAMAADAYNVIINAMNQCSDPHDRVCVNEKIRATKDFQGVT 346

Query: 353 GIYTMSPQDHMGLDVTAFRMVEVKDG 378
           G  T+   D +   V    + EVKDG
Sbjct: 347 GTLTLQNGDAIRSAV----INEVKDG 368