Pairwise Alignments

Query, 734 a.a., Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) from Variovorax sp. SCN45

Subject, 951 a.a., BarA sensory histidine kinase (= VarS = GacS) from Pseudomonas fluorescens FW300-N2E2

 Score = 87.4 bits (215), Expect = 3e-21
 Identities = 69/224 (30%), Positives = 116/224 (51%), Gaps = 11/224 (4%)

Query: 507 ELYKARTKLIAVLGHDLRDPLQSISMAAKMLERSLPAGNTLGERLGQRIQTSSSRMGRLI 566
           E  + +++ +A + H++R PL  I     +L++S      L + LG   +++ S +G +I
Sbjct: 315 EASRIKSEFLANMSHEIRTPLNGILGFTHLLQKSELTPRQL-DYLGTIEKSADSLLG-II 372

Query: 567 GQVLDASRLQSGLGLQVQPVPIDVARLLEDAVDEALTAYPGSQIEL----HAPKSLAMVG 622
            ++LD S++++G  L +  +P ++  LL+D +     A    Q+EL    +    L++VG
Sbjct: 373 NEILDFSKIEAGK-LVLDSIPFNLRDLLQDTLTILAPAAHAKQLELVSLVYRDTPLSLVG 431

Query: 623 DPDRMAQLIGNLVSNARHHGLPGEPV-RVILEQAH-DNVVLRVA--NTAPAIDPALVPEL 678
           DP R+ Q++ NLVSNA      G  V R +LE  H D+V LR++  +T   +    V  L
Sbjct: 432 DPLRLKQILTNLVSNAIKFTREGTIVARAMLEDEHEDSVQLRISIQDTGIGLSNQDVRAL 491

Query: 679 FSAFKRQTGPNIRNKGGLGLGLHIAQAIARSHHGSIGYGHVDGQ 722
           F AF +      R  GG GLGL I++ +     G IG     G+
Sbjct: 492 FQAFSQADNSLSRQPGGTGLGLVISKRLVEQMGGEIGVDSTPGE 535