Pairwise Alignments

Query, 472 a.a., MATE efflux family protein from Variovorax sp. SCN45

Subject, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 103/418 (24%), Positives = 183/418 (43%), Gaps = 30/418 (7%)

Query: 40  PMLLSNILQSLSGTLNNIYVGQMLGVGALAAVSSFFPVMFFFIAFIIGLGAGASVLIGQA 99
           P+ L NI+ S  G ++ + +GQ LG   +AAV       F     ++G+  G ++L  Q 
Sbjct: 25  PITLQNIMFSSRGLVDVLMLGQ-LGEAEIAAVGVAARATFVTTIMLVGVTTGGALLTAQY 83

Query: 100 WGARDAAKAKAVAGTTLTVGVLTGLVIAVFGGAFTTPMLASLGTPPDVLADSTRYARI-- 157
           WGA D    K V  +T     LT LV   F  AF T +L  L  P  +++ +T   ++  
Sbjct: 84  WGAGDR---KGVREST----ALTWLVSNFF--AFFTVLLF-LFFPQQIMSLTTDSEQVNA 133

Query: 158 -----MLIAMPGLFVFLLATAMLRGVGDTVTPLLTLMISTL---IGLVVTPALIRGWGGL 209
                ++I    +F     ++M  G+     P ++   S +     +V+   LI G  G 
Sbjct: 134 LGSQYLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWILIFGKFGF 193

Query: 210 PQLGVASGAWASVLSFTVATIWLGFRLRQRKSPLAPDAEFMRNLRIQPQLLKAVLKIGVP 269
           P +G+   A A+VLS  +    L   L  +K  +A   + ++ +   P++ +  L++ +P
Sbjct: 194 PAMGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPKISR-FLRLSLP 252

Query: 270 TGVQMIVVALAEVVLLSMVNSYGSSATAAYGAVNQVVAYVQFPAISIAITASILGAQAIG 329
           T    ++ A       +++   G    AA   +  V +      I ++  A++L    +G
Sbjct: 253 TTFNFLIWAAGLFTYHAIMGQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVLVGNQLG 312

Query: 330 AG--RANRLGAIAKTALLMNVVLTGGLVVLG-YLFSRHLMAFFITSEP-VLEIAQTLLHI 385
           A    A    AI  TA     VL G +V +G YL    ++  F    P   E+++  + I
Sbjct: 313 AKNYEAVYYQAIGVTAC---SVLVGIVVAIGLYLVQIPVLGAFTALTPETRELSEKFMLI 369

Query: 386 MLWSLVIFGM-ASALSGIMRASGSVLVPTLISIVCILGVEVPVAYAMSHRLGLDGIWI 442
           +   +V+     +A+ G++RA G V       IV    + +P+A   +  L ++  WI
Sbjct: 370 LCLGIVLRSFPMTAIVGVLRAGGDVKFCLGQDIVAQWCIGIPLAAFAALVLKVEPEWI 427