Pairwise Alignments

Query, 472 a.a., MATE efflux family protein from Variovorax sp. SCN45

Subject, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 74.7 bits (182), Expect = 6e-18
 Identities = 98/443 (22%), Positives = 190/443 (42%), Gaps = 21/443 (4%)

Query: 28  RPLWKVFLLFLAPMLLSNILQSLSGTLNNIYVGQMLGVGALAAVSSFFPVM--FFFIAFI 85
           R +++ F+ +  P + + ++  L   ++ I++G  +G   LA ++  +PV+     I  +
Sbjct: 4   RSIYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGIGML 63

Query: 86  IGLGAGASVLIGQAWGARDAAKAKAVAGTTLTVGVLTGLVIAVFGGAFTTPMLASLGTPP 145
           +G+G GA   I Q  G  D+AK   +  T L   +L   ++AV         L   G   
Sbjct: 64  VGVGTGALASIKQGEGHPDSAKR--ILATGLMSLLLLAPIVAVILWFMADDFLRWQGAEG 121

Query: 146 DVLADSTRYARIMLIAMPGLFVFLLATAMLRGVGDTVTPLLTLMISTLIGLVVTPALIRG 205
            V     +Y +++++        +    +LR   D    L TL++  +IG +   AL   
Sbjct: 122 RVFELGLQYLQVLIVGCLFTLGSIAMPFLLRN--DHSPNLATLLM--VIGALTNIALDYL 177

Query: 206 WGGLPQLGVASGAWASVLSFTVATIWLGFRLRQRKSPLAPDAEFMRNLRIQPQLLKAVLK 265
           +    Q  +   A A+ L+  V T+ LG  L    S  A      R LR++   L  +  
Sbjct: 178 FIAWLQWELTGAAIATTLAQVVVTL-LG--LAYFFSARANMRLTRRCLRLEWHSLPKIFA 234

Query: 266 IGVPTGVQMIVVALAEVVLLSMVNSYGSSA-TAAYGAVNQVVAYVQFPAISIAITASILG 324
           IGV +       +    +  +++  YG++    AY  +  +V         IA     L 
Sbjct: 235 IGVSSFFMYAYGSTMVALHNTLMIEYGNAVMVGAYAVMGYIVTIYYLTVEGIANGMQPLA 294

Query: 325 AQAIGAGRANRLGAIAKTALLMNVVLTGGL--VVLGYLFSRHLMAFFITSEPVLEI-AQT 381
           +   GA   + +  + + A  M + + GG+  V++  LF    +A F +S+  L   AQ 
Sbjct: 295 SYHFGARNYDHIRKLLRLA--MGIAVLGGMAFVLVLNLFPEQAIAIFNSSDSELIAGAQM 352

Query: 382 LLHIMLWSLVIFGMASALSGIMRASGSVLVPTLISIVCILGVEVPVAYAMSHRLGLDGIW 441
            + + L+++ + G     +   +++        I+ V  + + +P  + +    GL G+W
Sbjct: 353 GIKLHLFAMYLDGFLVVSAAYYQSTNRGGKAMFIT-VGNMSIMLPFLFILPQFFGLTGVW 411

Query: 442 IAYPVTFGAMLLLQTAYYQLVWR 464
           IA P+   + ++L T    ++WR
Sbjct: 412 IALPI---SNIVLSTVVGIMLWR 431