Pairwise Alignments

Query, 472 a.a., MATE efflux family protein from Variovorax sp. SCN45

Subject, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

 Score =  101 bits (252), Expect = 5e-26
 Identities = 92/418 (22%), Positives = 185/418 (44%), Gaps = 19/418 (4%)

Query: 33  VFLLFLAPMLLSNILQSLSGTLNNIYVGQMLGVGALAAVSSFFPVMFFFIAFIIGLGAGA 92
           + + ++ P +   ++  + G ++ I++G+ +G   LA V+  FPV+    +  + +GAG+
Sbjct: 15  LMIRYVIPSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVLIAISSIGVMIGAGS 74

Query: 93  SVLIGQAWGARDAAKAKAVAGTTLTVGVLTGLVIAVFGGAFTTPMLASLGTPPDVLADST 152
           S +I  + G +D  KA  +  T LT  +L  L+I  FG     P+++ +    ++ +   
Sbjct: 75  SAIISISLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVISFMNLSKNLESYVV 134

Query: 153 RYARIMLIAMPGLFVFLLATAMLRGVGDTVTPLLTLMISTLIGLVVTPALIRGWGGLPQL 212
            Y++I+++        +    +LR  G     ++ L + ++  +++   LI  +      
Sbjct: 135 GYSKIIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSVFNIILDYMLIVVFN----F 190

Query: 213 GVASGAWASVLSFTVATI-----WLGFRLRQRKSPLAPDAEFMRNLRIQPQLLKAVLKIG 267
           GV   A A+VL+  + +I     +L  +   +    +P  EF         L+K + K G
Sbjct: 191 GVMGAAAATVLAQGLGSILYLKHFLSGKSNVKIGKNSPFLEF--------SLIKRIAKTG 242

Query: 268 VPTGVQMIVVALAEVVLLSMVNSYGSSA-TAAYGAVNQVVAYVQFPAISIAITASILGAQ 326
               +  +   +  +V       YGSS   +AYG V  + +++    + I+     L + 
Sbjct: 243 FSPFIMELAFGILMIVHNIQFMRYGSSLDVSAYGIVIYITSFLYMVYLGISEGVQPLISY 302

Query: 327 AIGAGRANRLGAIAKTALLMNVVLTGGLVVLGYLFSRHLMAFFITSEPVLEIAQTL-LHI 385
             GA + NR+  I K A+ +N +L     +    F   L+  F   +  L    T+ L I
Sbjct: 303 NHGAKKFNRVFEILKKAVFVNAILGICSFLTILKFPNLLIKIFNPHDTNLIATTTIGLEI 362

Query: 386 MLWSLVIFGMASALSGIMRASGSVLVPTLISIVCILGVEVPVAYAMSHRLGLDGIWIA 443
             ++++I G++  L     A+    +   +S+   L   +P    +   LG+ GIW A
Sbjct: 363 HNFAILIMGVSMVLMMYFLATEQPKIAGFLSLGRTLIFILPAIILLPIYLGIKGIWWA 420