Pairwise Alignments

Query, 313 a.a., Putative transport protein from Variovorax sp. SCN45

Subject, 291 a.a., cation diffusion facilitator family transporter from Methanococcus maripaludis S2

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 74/295 (25%), Positives = 144/295 (48%), Gaps = 22/295 (7%)

Query: 4   SKIAIYGAIGANVAIAVTKFVVAGITG-SSAMLSEGIHSAVDTFNGVLLLVGLRLSKRPA 62
           SKI I     AN+A+++ K ++AG+ G SSA++++G+HS  D  + V++++GL+LS++PA
Sbjct: 14  SKITII----ANIALSILK-ILAGVFGKSSALIADGMHSFSDILSTVVVMLGLKLSEKPA 68

Query: 63  TVEHPFGHGKELYFWSLIVAVLIFGLGGGVSFFEGIQHIRNPEPMRDPTWNYVVLAAAAL 122
              HP+GH +     + I+AV++  +   + F+ G+  I           N  ++AA   
Sbjct: 69  DESHPYGHERIEPALTKILAVILL-VTALMIFYCGLTTIIGGN--YQIPGNITIIAAL-- 123

Query: 123 FEGTSFFIALKEFRAQARGQPFWQALDRSKDPTTYTVLAEDSAALAGLAVAALGIYFSHS 182
               S F     ++   +G    ++     D   +     D+ +  G  +  +G      
Sbjct: 124 ---ISIFTKEWMYKYTKKGAEQIESSALLADAWHH---RSDAFSSVGTLIGVVGA----K 173

Query: 183 LGMPELDGVASVVIGLLLAGVAVFLISQARGLLIGEGIRPETARAIRAIAMEQPGVEDVG 242
           LG P LD +AS+VI L +A +A  +  +A   L+      +T   I+ I +   GV ++ 
Sbjct: 174 LGYPILDPIASIVISLFIAKMAFEIYFKALNQLLDRAADSKTIEEIKKIILSVDGVLEI- 232

Query: 243 HVLSMYIGADEVLVVVDVNFRDDTSTGDAADAVAAIERQVRARFPMIKRIFIEAS 297
            VL   I ++++ V V+++   D S  +A +    +  Q+ ++   +K   +  +
Sbjct: 233 DVLKTRIHSNKIYVDVEISVDKDLSLIEAHNISENVHSQIESKLKRVKHCMVHVN 287