Pairwise Alignments

Query, 632 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

Subject, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  149 bits (377), Expect = 2e-40
 Identities = 95/416 (22%), Positives = 204/416 (49%), Gaps = 17/416 (4%)

Query: 219 MALGMPIAFVLALSSLVFFMADPSLPMLVYSQ-QVMAGTDHYVLLAIPFFVLAGLLMEAN 277
           + LG P+AF     +L+F +    + M  +   ++ +  ++ VL+A+P FV  GL+++  
Sbjct: 14  LLLGFPVAFTFGGIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPLFVFMGLVLQKT 73

Query: 278 GMSSRLIELLLRMFGRLRGGLGLITITATAFFSGVSGSKLADIAAVGGIIMPAVRKTKQD 337
            ++ +L+E + R+FG + GG+ + T+      +  +G   A + A+G I +P + K + D
Sbjct: 74  KLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLISLPVMLKYRYD 133

Query: 338 PNETAGLLACTAVMAETIPPCINMIIMGFVANISIAGLFMAGLVPAVVLAVSLAAVTIYV 397
                G +  +  + + IPP I +I++G V  + +  LF A L P ++L V+   + I +
Sbjct: 134 KGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGLML-VAAYIIYILI 192

Query: 398 GTKINPDEAFDV--------RTPMFRLLGGALVALVMVAMIGKGVTSGVATSTEVSSFAV 449
             K+NP  A  +        R  + + L   +  L ++ ++   + +GVAT TE ++   
Sbjct: 193 YAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAGVATPTESAALGG 252

Query: 450 IYALVVGWLAFRELTVKSVARLFVRSASMAGGILFIVAAASSLSFALTIQQIPQYLSEFM 509
             A+++  LA+ + +   V      +  +   +  I+  A++ S A T     + + E+M
Sbjct: 253 AGAILLA-LAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTYTGGDELVEEWM 311

Query: 510 IGF-AHSYGSTMFVMLSVLIMIVFGAILEGAPALIIFGPLLTPIASQLGVNPLHFGTVMV 568
           +      +G   F+++++L++++ G  ++      I  P+L P+A  + V+   F  ++ 
Sbjct: 312 MNLPGDKWG---FLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVDMTWFAILIA 368

Query: 569 IAMGFGLFAPPVGLGLFATCAITGTQV--KDVARPMLKYLAVLFVTLVVLVLVPAF 622
           + +      PP G  LF    +    V   D+ R ++ ++ +  + L+ L++ P+F
Sbjct: 369 MNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISLMVFPSF 424