Pairwise Alignments

Query, 632 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

Subject, 909 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  175 bits (443), Expect = 9e-48
 Identities = 128/429 (29%), Positives = 211/429 (49%), Gaps = 12/429 (2%)

Query: 210 LLAAGFFGGMALGMPIAFVLALSSLV-FFMADPSLPMLVYSQQVMAGTDHYVLLAIPFFV 268
           ++ A  F  +A GMPIAF L L++    +M   +    V    + +G  +   ++IP FV
Sbjct: 1   MIVACLFVLLATGMPIAFALGLAAFAALYMQSGAGIFYVLGDTMFSGIANLAYVSIPMFV 60

Query: 269 LAGLLMEANGMSSRLIELLLRMFGRLRGGLGLITITATAFFSGVSGSKLADIAAVGGIIM 328
           L G  + ++   S L   L R   R+ GGL L  I A A FSG++GS  A  AA+G + +
Sbjct: 61  LMGAAVASSPAGSDLYTSLDRWLNRIPGGLILSNIGACAIFSGMTGSSPATCAAIGKMGI 120

Query: 329 PAVRKTKQDPNETAGLLACTAVMAETIPPCINMIIMGFVANISIAGLFMAGLVPAVVLAV 388
           P + +     +  +G +A    +   IPP + +I+ G     SI  LFMAG++P ++L +
Sbjct: 121 PEMMRRGYPASVASGSIAAGGTLGILIPPSVTLIVYGIATETSIGRLFMAGILPGILLTI 180

Query: 389 S-LAAVTIYVGTKINPDEAFDVRTPM---FRLLGGALVALVMVAMIGKGVTSGVATSTEV 444
             +    I    K    EA  VR  M     +L   L  L+++A     +  G+AT +E 
Sbjct: 181 MFMTWAVIDCKRKGYEFEARLVRYSMKERLAVLPRILPFLLIIAGTLYVLYGGIATPSEA 240

Query: 445 SSFAVIYALVVGWLAFRELTVKSVARLFVRSASMAGGILFIVAAASSLSFALTIQQIPQY 504
           +       L V  +A+R    + VA +F  +   +  I+ I+AAA   +FAL+   I Q 
Sbjct: 241 AGAGAFLTLAVVIVAYRLFRFRPVAGIFGSAMKESVMIMMIMAAAELFAFALSSLFITQT 300

Query: 505 LSEFMIGFAHSYGSTMFVMLSVL--IMIVFGAILEGAPALIIFGPLLTPIASQLGVNPLH 562
           ++  +           +V+++V+   +++ G  L     +++  P+L PI +Q G +P  
Sbjct: 301 VAAAIADME----VNRWVLMAVINVFLLICGMFLPPVAVIVMTSPMLFPIVTQAGFDPYW 356

Query: 563 FGTVMVIAMGFGLFAPPVGLGLFATCAIT-GTQVKDVARPMLKYLAVLFVTLVVLVLVPA 621
           F  V+ I M  GL  PP+GL LF   AI      KD+    L Y+ V+F+ +++L + P 
Sbjct: 357 FAIVLTINMEVGLITPPIGLNLFVINAIAPQIPTKDILWGSLPYVLVMFLAIILLCVFPD 416

Query: 622 FSTWLPMRM 630
            +TWLP +M
Sbjct: 417 VATWLPNQM 425