Pairwise Alignments

Query, 632 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

Subject, 437 a.a., large C4-dicarboxylate uptake permease, DedA family protein from Sinorhizobium meliloti 1021

 Score =  206 bits (524), Expect = 2e-57
 Identities = 129/431 (29%), Positives = 219/431 (50%), Gaps = 14/431 (3%)

Query: 203 HAIAPWALLAAGFFGGMALGMPIAFVLALSSLVFFMADPSL-PMLVYSQQVMAGTDHYVL 261
           H   P  L+   F     L  PI + +A+ +  FF+ +  + P+  ++Q++  G+    L
Sbjct: 5   HLAGPSLLVVVLFL----LSTPITWAMAIGAFAFFLINMDMIPLANFAQEMAEGSQSVSL 60

Query: 262 LAIPFFVLAGLLMEANGMSSRLIELLLRMFGRLRGGLGLITITATAFFSGVSGSKLADIA 321
           LA+P FVLAG +M A+G++ RL+ L   + G + G L  +         G++ S  AD A
Sbjct: 61  LALPLFVLAGCIMNASGITRRLLALADVLVGHMTGALAQMCTVLGTLLGGLTASANADAA 120

Query: 322 AVGGIIMPAVRKTKQDPNETAGLLACTAVMAETIPPCINMIIMGFVANISIAGLFMAGLV 381
            +   +   + +        A + +  A++   IPP I +I+ GF+A  SI  LF AG++
Sbjct: 121 MLAKTLGVEMSQRGYSRAFAAVITSSAAIITSLIPPSIGLIVYGFLAETSIGRLFAAGVI 180

Query: 382 PAVVLAVSLAAVTIYVGTK-----INPDEAFDVRTPMFRLLGGALVALVMVAMIGKGVTS 436
           P +VLA  L   T ++  K     +  + A   R    R L   L AL +  +I  G   
Sbjct: 181 PGLVLATGLMVTTYFIARKRGYKPLRKERA--TRAEGVRALIDGLWALSIPVVIFAGTRY 238

Query: 437 GVATSTEVSSFAVIYALVVGWLAFRELTVKSVARLFVRSASMAGGILFIVAAASSLSFAL 496
           G+ T+TE  +  V+Y L V    +RE T + +  +   +   +  ++ ++ AA++  F L
Sbjct: 239 GLFTTTEAGAVVVVYVLFVAVFGYREFTFRQIPEVLAEAVRDSAVVMIMICAAAAFGFYL 298

Query: 497 TIQQIPQYLSEFMIGFAHSYGSTMFVMLSVLIMIVFGAILEGAPALIIFGPLLTPIASQL 556
             +Q+PQ +S ++ G A      M ++++VL+ IV G  +EG+ ALII  P+L PI   +
Sbjct: 299 AWEQVPQAMSGWL-GEATDNPLLMLLLINVLL-IVIGTAIEGSAALIILTPMLIPIIDGV 356

Query: 557 GVNPLHFGTVMVIAMGFGLFAPPVGLGLFATCAITGTQVKDVARPMLKYLAVLFVTLVVL 616
           G++ +HFG V +  +      PPVG  ++ +  +    +   AR +L YLA++ V LV+L
Sbjct: 357 GIDRVHFGVVFITNLTIAGITPPVGGLMYISSMVLKVPMMAYAREVLPYLAMMMVILVML 416

Query: 617 VLVPAFSTWLP 627
            + P  S WLP
Sbjct: 417 SMFPQLSLWLP 427