Pairwise Alignments

Query, 632 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

Subject, 426 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  249 bits (635), Expect = 2e-70
 Identities = 135/420 (32%), Positives = 234/420 (55%), Gaps = 9/420 (2%)

Query: 209 ALLAAGFFGGMALGMPIAFVLALSSLVFFMADPSLPMLVYSQQVMAGTDHYVLLAIPFFV 268
           ++      G MALG+PIAF L LS +   +        + +Q V+ G D + L+A+PFF+
Sbjct: 4   SIFLGALLGPMALGVPIAFALILSGVALMLYLGLFDAQIVAQNVLNGADSFPLMAVPFFL 63

Query: 269 LAGLLMEANGMSSRLIELLLRMFGRLRGGLGLITITATAFFSGVSGSKLADIAAVGGIIM 328
           LAG +M   G+S R++ L + M G +RGGLG + I A    S +SGS +AD AA+G +++
Sbjct: 64  LAGEVMNTGGLSRRIVALAMAMVGHIRGGLGFVAIFAACILSSLSGSAVADAAALGALLL 123

Query: 329 PAVRKTKQDPNETAGLLACTAVMAETIPPCINMIIMGFVANISIAGLFMAGLVPAVVLAV 388
           P + K+  DP   +GL+A  +++   IPP I  I+ G V  +SI  LF+AG+ P +++A 
Sbjct: 124 PMMLKSGHDPARASGLIASASIIGPIIPPSIGFILFGVVGGVSITKLFLAGIFPGLMIAA 183

Query: 389 SLAAVTIYVGTK----INPDEAFDVRTPMFRLLGGALVALVMVAMIGKGVTSGVATSTEV 444
           +L+   + V  K    + P ++  +R    R    +L AL +  +I  G+  GV T TE 
Sbjct: 184 ALSITWLIVARKEQFELPPRQSGRLR---LRAFVDSLWALFLPVIIIAGLKFGVFTPTEA 240

Query: 445 SSFAVIYALVVGWLAFRELTVKSVARLFVRSASMAGGILFIVAAASSLSFALTIQQIPQY 504
              A +Y+L V  + +REL    +  +FV +A ++  ++F+VA A+  ++ +T+  +P  
Sbjct: 241 GVIAAVYSLFVSMVVYRELAPAQLFHVFVSAAKISAVVMFLVACAAVSAWLITVADVPGA 300

Query: 505 LSEFMIGFAHSYGSTMFVMLSVLIMIVFGAILEGAPALIIFGPLLTPIASQLGVNPLHFG 564
           L+  +     +  + + + + VLI+IV G  ++  P ++I  P+L P+  Q G++P++FG
Sbjct: 301 LAALLEPLMGNQ-TALLIAIMVLIVIV-GTAMDMTPTILIMTPVLMPVIKQAGIDPVYFG 358

Query: 565 TVMVIAMGFGLFAPPVGLGLFATCAITGTQVKDVARPMLKYLAVLFVTLVVLVLVPAFST 624
            + +I    GL  PPVG  L   C ++   ++D+ + ++ +L    + L +LVL P   T
Sbjct: 359 VLFIINNSIGLITPPVGTVLNVICGVSKLSMEDLMKGVMPFLFAELIVLFLLVLFPELVT 418