Pairwise Alignments

Query, 345 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

Subject, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  103 bits (256), Expect = 8e-27
 Identities = 68/274 (24%), Positives = 124/274 (45%), Gaps = 3/274 (1%)

Query: 32  AQEKTVALRLSSSHVADLNSSHFAWSQLMQANLKKAVGEQIRIDYFPNNQLGKESDVVQQ 91
           A     A  L     A + S  +  ++++   L++    +I++  +P+ QLG +  ++QQ
Sbjct: 17  AASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQ 76

Query: 92  VKVGSIDMMLTGSSIWATVTPQLGMLDLGYLFDSYDHVARAIDAGVGAKLND-MLARSTG 150
           + +G +D+            P+   + L Y+   +DH+ R  ++  G  + D ML +   
Sbjct: 77  LTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNW 136

Query: 151 CQIITWGAHYGARNVYTKQPVKSLADIRNVKLRVLPTPAFIETFKIMGAIPTPISFGELY 210
             + TW  + G R   + +P+ S+ D + +KLRV      +   K+ GA PTP+SF E+Y
Sbjct: 137 RALDTW--YNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVY 194

Query: 211 MAAQTGVVDGFEHDAGTVLANKLNEVVKHCWMTEHLFSPMVCVAGKRAMDRVPAALRPAF 270
           +A QT  VDG E+   T+   K  EV K+  MT H+ +  + +  +    ++    +   
Sbjct: 195 LALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDII 254

Query: 271 LKAAADSTLQQRQIGNERSQQAIDDLKKTGITFT 304
            KA         Q    +  + +   K  GI  T
Sbjct: 255 QKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVT 288