Pairwise Alignments

Query, 345 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

Subject, 325 a.a., C4-dicarboxylate transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 90.1 bits (222), Expect = 7e-23
 Identities = 75/284 (26%), Positives = 121/284 (42%), Gaps = 2/284 (0%)

Query: 18  LAAATTGGFSPYAFAQEKTVALRLSSSHVADLNSSHFAWSQLMQANLKKAVGEQIRIDYF 77
           +AAA     S    A  +  +LR S+S V + N       +     + +  G +I I   
Sbjct: 5   IAAAAMAALSFCGIANAQEYSLRFSTSQV-NPNEPIIKAMKTYAERVGERSGGRIAITVM 63

Query: 78  PNNQLGKESDVVQQVKVGSIDMMLTGSSIWATVTPQLGMLDLGYLFDSYDHVARAIDAGV 137
             +QLG +  V + V  G+  +  T         P L +L   Y++       R   + +
Sbjct: 64  TGDQLGAQKKVNEMVMSGASLLSATDYGQLGQFVPDLSILAGPYVYPDLAATDRLFASDL 123

Query: 138 GAKLNDMLARSTGCQIITWGAHYGARNVYTKQPVKSLADIRNVKLRVLPTPAFIETFKIM 197
              L+  L  + G +II     +G R++   +PV+S AD+  V +RV  +P  + TF   
Sbjct: 124 YKDLSGKL-EARGIKIIMPNGLFGYRHIIANKPVRSPADLAGVTIRVPSSPIMMATFGNY 182

Query: 198 GAIPTPISFGELYMAAQTGVVDGFEHDAGTVLANKLNEVVKHCWMTEHLFSPMVCVAGKR 257
           GA PT + +G++Y A QTGVVD  E   G++   KLNE  K    T H       VA  +
Sbjct: 183 GARPTELPWGDVYNALQTGVVDAAEGPFGSIAGAKLNETRKVISKTGHQIMFTAWVASSQ 242

Query: 258 AMDRVPAALRPAFLKAAADSTLQQRQIGNERSQQAIDDLKKTGI 301
             + +P  L+   L+       +  Q+  E        L  +G+
Sbjct: 243 FFNSLPEDLQTILLEEGQTIAKELTQMTLETDDAYAKQLAASGV 286