Pairwise Alignments

Query, 345 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

Subject, 323 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  111 bits (278), Expect = 2e-29
 Identities = 70/274 (25%), Positives = 133/274 (48%), Gaps = 9/274 (3%)

Query: 64  LKKAVGEQIRIDYFPNNQLGKESDVVQQVKVGSIDMMLT---GSSIWATVTPQLGMLDLG 120
           +K+  G ++ ++ FPN+QLG  +++++QV +G +D  L    G   W    P+  +    
Sbjct: 50  IKEKSGGRLTLEIFPNSQLGTFTEMMEQVTLGELDFTLNPFGGMDAWV---PRAVLASTA 106

Query: 121 YLFDSYDHVARAIDAGVGAKLNDMLARSTGCQII-TWGAHYGARNVYTKQPVKSLADIRN 179
           Y+   +DH+ + I +  G  + D +      +++ +W  ++G R+   K+P++  AD   
Sbjct: 107 YVVGDFDHLQKIIASDWGKGIVDEMRTEHKWRMVDSW--YFGTRHTTAKKPIEKPADFAG 164

Query: 180 VKLRVLPTPAFIETFKIMGAIPTPISFGELYMAAQTGVVDGFEHDAGTVLANKLNEVVKH 239
           +KLRV  +   +   K MGA PTP++F E+Y+A QT  VDG E+    + + K  EV  H
Sbjct: 165 MKLRVPNSAPLLTWAKAMGASPTPVAFAEVYLALQTNQVDGQENPLPIIDSMKFTEVQSH 224

Query: 240 CWMTEHLFSPMVCVAGKRAMDRVPAALRPAFLKAAADSTLQQRQIGNERSQQAIDDLKKT 299
             +T HL    V +  +   + +  A +   ++A         ++ +++    + D ++ 
Sbjct: 225 VSLTGHLVQDQVILMSEDTWNALEPADQKVVMEAFEAGGALNDKLVSDKEANLVSDFRER 284

Query: 300 GITFTPMAKSERDQVRKEMETKLWAGFAKQYPET 333
           GIT     K+   +  K +   L A F     +T
Sbjct: 285 GITVVEPDKAAFQEAMKPVYADLDAKFGADTVKT 318