Pairwise Alignments

Query, 452 a.a., Uncharacterized transporter YebQ, major facilitator superfamily (MFS) from Variovorax sp. SCN45

Subject, 537 a.a., Integral membrane drug efflux protein Stp from Mycobacterium tuberculosis H37Rv

 Score =  179 bits (455), Expect = 1e-49
 Identities = 126/414 (30%), Positives = 203/414 (49%), Gaps = 17/414 (4%)

Query: 6   LGLIVSVLDGTIVNLALPGIARELQASPSQAIWVVNAYQIATLVMLLPLASLGDLVGYRR 65
           LGL +  LD  IVN+ALP I R          WVV +Y +   V ++  A+L DL G RR
Sbjct: 14  LGLFMIFLDALIVNVALPDIQRSFAVGEDGLQWVVASYSLGMAVFIMSAATLADLDGRRR 73

Query: 66  VYLVGLAVFTLSSLAATFANSLATLTAARAFQGLGAAGIMSVNAALVRLTYP-SSQLGKG 124
            YL+G+++FTL S+A   A S+A LT AR  QGLGAA +   + ALV   +P + +  + 
Sbjct: 74  WYLIGVSLFTLGSIACGLAPSIAVLTTARGAQGLGAAAVSVTSLALVSAAFPEAKEKARA 133

Query: 125 MALNSLVVATSSVAGPSVAAAILSVASWPWLFAINVPLGIVTFALGMRALPFNRVAPAAG 184
           + + + + +  +  GP++   ++    W  +F +N+P+G +   L +       V  +  
Sbjct: 134 IGIWTAIASIGTTTGPTLGGLLVDQWGWRSIFYVNLPMGALVLFLTL-----CYVEESCN 188

Query: 185 LRFSPVDVGLNVLMFSLVFLGVDRLGVREGPVQGAGGSQASAWGILLAGLAVG---FVYL 241
            R    D+   +L   +V +G     V EGP  G    Q     ++L   AVG   FV+L
Sbjct: 189 ERARRFDLSGQLLF--IVAVGALVYAVIEGPQIGWTSVQTI---VMLWTAAVGCALFVWL 243

Query: 242 RRQRKQAVPLFPIDLLRIPVFALSMGTSVAAFCAQMLAYIALPFLLLDAYGRSHIEAGLL 301
             +R+ + P+  + L R   +AL++ T    F A     +     L +  G +    GL+
Sbjct: 244 --ERRSSNPMMDLTLFRDTSYALAIATICTVFFAVYGMLLLTTQFLQNVRGYTPSVTGLM 301

Query: 302 ITAWPLGIVVMAPIAGRLIGRYPDGLLGGIGLALLASGLALLAALPAHPGNADIAWRMAL 361
           I  +   + +++P+ G L+GR    +    GL +L  GL L+     H  +A +   + L
Sbjct: 302 ILPFSAAVAIVSPLVGHLVGRIGARVPILAGLCMLMLGL-LMLIFSEHRSSALVLVGLGL 360

Query: 362 CGLGFGLFQSPNNHTIVTSPPAHRSGAASGMLGTARLTGQTLGAVVLAAVFSLW 415
           CG G  L  +P     +T+ PA R+G ASG++   R  G T+G  VL +V + W
Sbjct: 361 CGSGVALCLTPITTVAMTAVPAERAGMASGIMSAQRAIGSTIGFAVLGSVLAAW 414