Pairwise Alignments

Query, 305 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  182 bits (463), Expect = 7e-51
 Identities = 105/270 (38%), Positives = 154/270 (57%), Gaps = 3/270 (1%)

Query: 8   MPSREPPLNAVRAFAAAARHLSFTRAALELHVTHSAVSRQIKSLEEFLGVELFERRIRQV 67
           M  R PPLN+++ F AAARHLSFTRAA EL VT +AVS QIK+LEEFLG++LF RR R +
Sbjct: 1   MSRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSL 60

Query: 68  ALTAEGQQFFAEVEPALAQIGAAARALQAQGTARAVRINVRPSFAVRWLIPRLPSFVEQY 127
            LT EGQ +F +++   + +  A   L  +    A+ I++ PSFA++WL+PRL  F +Q 
Sbjct: 61  LLTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQE 120

Query: 128 PDIEPQVVTSTVMPEQAVDSFDIAVRRGREGWPPSIKVRPFLKDEVLVVGAPS-LFKTHP 186
           PDI+ ++    +      D  D+A+  GR  W P ++     ++ ++ + +P+ L    P
Sbjct: 121 PDIDVRIKAVDMDEGSLTDDVDVAIYYGRGSW-PGLRADKLYQEFLIPLCSPALLLGNKP 179

Query: 187 LPDLRSLAAHVLLSAKTRKDDWDAWKKQFGAPRARPAGRLQFDHLHFVLQAAVDGLGIAL 246
           +  L  LA H LL   +RK DW  + K+ G           F H   VLQAA  G G+AL
Sbjct: 180 MEKLSDLAYHTLLHDTSRK-DWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGVAL 238

Query: 247 APTSLVSHDLASGRLQSPLPALRMTLDRYY 276
               L   ++ +GRL +P   + MT + +Y
Sbjct: 239 GNNVLAQPEIDAGRLIAPFDEVLMTNNAFY 268