Pairwise Alignments

Query, 416 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 626 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 72/270 (26%), Positives = 115/270 (42%), Gaps = 21/270 (7%)

Query: 53  IGFLAAIQTLPFLLVSMPLGLLADRMSRRRLMVWAEGLRAVSLLMLLALVFWSK-LGIAW 111
           I   A +  LPF L S   G+LAD++ + R + W + L  +++++  A+ F ++  GI+ 
Sbjct: 58  INLAAGLFILPFFLFSATAGVLADKLEKSRYIRWVK-LLEIAIMLCGAIGFITQSYGIS- 115

Query: 112 LAVLGFLGAVGTVGFSVAAPALVPALVPRDALAVANERLELARSAAFTGGPALAGALVAW 171
              L FL    +  F     AL+P  +  + L   N  +E     A   G  L   L+A 
Sbjct: 116 -LFLLFLMGTQSAFFGPVKYALLPQQLKSEELVPGNALVETGTFLAILLG-TLGAGLIAS 173

Query: 172 AGASAAFVLAAVLSVSAVGLLLSLREAPLA-----HVASRRNPLLDVRDGARFVWRHELL 226
           A  +  F  AAV+  + +G  LS R  PLA     H+  R  P+   +   R   R   +
Sbjct: 174 ADNAHYFAAAAVVIFAVLG-YLSSRAIPLAPASAPHLEFRWQPITQTKQTLRIAKRDRAI 232

Query: 227 RPMLMTGAVFNISWF-VLQAAYVP----YAVRVLGLGAQAVGFTLAMYGAGMVFGALLTA 281
              +M      ISWF  L A Y+     +    L     AV F LA++  G+  G+L   
Sbjct: 233 FQSIMA-----ISWFWFLGAGYLTQFPNFTKLHLNGNEAAVSFLLALFSVGIAVGSLACD 287

Query: 282 RVVARMPFGRAIQIGPAAAVVAGALMAGTL 311
           ++         + +G       G LMA ++
Sbjct: 288 KLSGHRIEVGIVPLGSVGISFFGYLMATSI 317