Pairwise Alignments

Query, 331 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 294 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  149 bits (375), Expect = 1e-40
 Identities = 107/304 (35%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 8   IRTARRLPPLLSLRAFEAAAAHLSFQRAALELSVTPSAISHQVRALEDTLGQPLFRRLTR 67
           ++  R+LPPL +L+ FE AA    F +AA EL +T SA+SHQVR LE+  G+ LF R  R
Sbjct: 2   LKIMRKLPPLRALQVFETAARQQHFSKAATELCITQSAVSHQVRVLEEYFGEQLFDRQGR 61

Query: 68  QLALTPAGQRLFDDLRMGFDVLEAGIDKLRRPAASQQVTLTTNTAFAARWVLPRMAAFRK 127
           +L LTP GQ LF +L   F+ L + ++   R   +QQ+ L   ++FA +W++PR+A FR+
Sbjct: 62  KLQLTPKGQSLFIELERIFNEL-SDLNLKIRDTPNQQLCLAVYSSFAVKWLIPRLADFRR 120

Query: 128 ACPGIELRLHASDTLVDLARGDADIAVRSGSGNWPGLTAHELMPERYAPMCSPML----R 183
             P +++RL       DL+   ADI + +G  N  G     L  ER  P+CSP L    R
Sbjct: 121 QYPSVKIRLEMITQDPDLSTSTADIFI-AGKLNQRGYWQQLLHKERLIPVCSPNLYPKWR 179

Query: 184 LERVADLPKQQLIHCSWQPHALAPALWPRWFKEAGVAPRHGRSTKAPSGLSFSDETHAML 243
              + +  +Q L+     P  L    W +W   A   P +           FS    A+ 
Sbjct: 180 EINLGNFQQQALLIVDEGPLGLD---WHKW-SSAHKIPLNNEQQHL-----FSHIVMAIE 230

Query: 244 AALGGHGVALLSLTLSAEELRNGALVRPFGPALDTGSYFLATANGRE-HEPAVRAVWEWI 302
           AA+ G G+AL    + A ++  G LV    P + TG  F      R  +EPA+ A   W+
Sbjct: 231 AAIAGQGIALAPDFMVAGDISTGRLVAVNLPDVHTGFEFCFLCKQRRLNEPAIAAFSSWL 290

Query: 303 VSQA 306
            SQA
Sbjct: 291 KSQA 294