Pairwise Alignments

Query, 491 a.a., macromolecule metabolism; macromolecule degradation; degradation of proteins, peptides, glycopeptides from Variovorax sp. SCN45

Subject, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

 Score = 56.2 bits (134), Expect = 2e-12
 Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 30/191 (15%)

Query: 105 WAGTDPQAKPIALMAHQDMVPIAPGTEKAWTVDPFAGEIKDGYVWGRGTLDNKSNLFAQM 164
           WA    Q+       H D+VP  P ++  W   PF   + DG++ GRG  D K +L   +
Sbjct: 53  WARRGTQSPLFVFAGHTDVVPAGPLSQ--WHTPPFEPTVIDGFLHGRGAADMKGSLACMI 110

Query: 165 EAIELLIGAGFKPKQTVYLVMGDDEEVSGLRGALPIAELLKSRNVRLDWVLDEGLLVLDG 224
            A+E  I      + ++  ++  DEE   + G + + E L +RN  +D  +         
Sbjct: 111 VAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCI--------- 161

Query: 225 VLPGLSKPAALIGLAE------KGYGTFFLSLDTAPGHSSMP-----PQHSAIGSMSAAL 273
               + +P++ + + +      +G  T  L +    GH + P     P H A+     AL
Sbjct: 162 ----VGEPSSTLAVGDVVKNGRRGSITGDLKVKGTQGHVAYPHLANNPVHKAL----PAL 213

Query: 274 ARLEANPMPGG 284
           A L A     G
Sbjct: 214 AELAATQWDEG 224