Pairwise Alignments

Query, 547 a.a., 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type from Variovorax sp. SCN45

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  145 bits (365), Expect = 5e-39
 Identities = 105/364 (28%), Positives = 175/364 (48%), Gaps = 14/364 (3%)

Query: 176 DENSASSMCYTSGTTGNPKAALYSHRSTMLHAYAAALPDVMRISAQDSVLPVVPMFHVNA 235
           D +   +M YTSGTTG PK  + +H++ + + Y   + +  + + ++ +   VP+FH   
Sbjct: 187 DSDDVINMQYTSGTTGFPKGVMLTHKNILNNGYY--IGEKQKFTEEERLCLPVPLFHCFG 244

Query: 236 WGIPYSAALVGCKLVFPGPSLDGKSVYELIESEGVTFAAGVPTVWQMMLGHMQTNGLKFS 295
             +   A L     +      D   V   I+ E  T   GVPT++     H        S
Sbjct: 245 IVLGVLALLTHGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHPMFEMFDLS 304

Query: 296 KLNRTVIGGSACP-PAMITAFQEKYNVEVLHAWGMTEMSPLGTLCTLKNKHLSLPADAQL 354
            L   ++ GS CP  AM     + Y  E+  ++G+TE SP+ T+ ++ +     P + ++
Sbjct: 305 SLRTGIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVFTMTSVDD-----PFEKRV 359

Query: 355 QIRMKQGRAIFGVDMKIVDGDGNELPWDGKAYGDLLVKGPWVVKEYFKGEGGDPLIADAQ 414
           +     G+A+   ++KI+D +  E    G   G++  +G  V+K Y+K       + +  
Sbjct: 360 E---SVGKAMPHCEVKIIDPETGETLAPGNV-GEICCRGYNVMKGYYKMPEKTAEVIEKD 415

Query: 415 GRGWFPTGDVATIDADGYLQITDRSKDVIKSGGEWISSIDIENIAVAHPAVAMAACIGVF 474
           G  W  +GD+A  D DGY +I  R KD+I  GGE I   +IE      P +  A  +G+ 
Sbjct: 416 G--WLHSGDLAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIP 473

Query: 475 HPKWDERPIIAVVKKPGAEVTREELLKFYEGKTAKWQIPDDVVFVEAIPLGATGKILKTR 534
             K+ E     V+ K G E+  E++  F   K A++++P  V  VE  P+ A+GKI K +
Sbjct: 474 DEKYGEIVGAFVIPKEGYEIKEEDVRDFALEKIARYKVPKHVFVVEEFPMTASGKIQKFK 533

Query: 535 LREL 538
           L EL
Sbjct: 534 LTEL 537