Pairwise Alignments

Query, 695 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 559 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  130 bits (328), Expect = 1e-34
 Identities = 119/354 (33%), Positives = 163/354 (46%), Gaps = 36/354 (10%)

Query: 328 LERRAQHMFDDAMRPEDGWPTGDGE------IGQLGQVLRRVGVQRAELERLNGEMFSKL 381
           L+RR   +F  A+      P  DG       +G    +  R G + A LE        + 
Sbjct: 212 LQRRDGQVFPAALTLS---PVCDGNRRLVQVVGLCADITERKGREIALLESEK-----RF 263

Query: 382 RSVMRAAPIGIAFIR-DRRFELVSDELCRLLSYREDELLGKPVDLIVVPEEDQPA-LAAL 439
           R  M  AP+G+A +  D R   V+  LC++L Y  + L     + +  P+ED  A LA  
Sbjct: 264 RDFMEFAPVGMAIVNLDGRLGKVNQALCQILGYSREALERLSFEDLT-PDEDLAADLAMW 322

Query: 440 EKEAFASSNSYVGEARMQRGDGSRFW-----ARLRSRPVDPEHTDFGSIWTVLNIEEQRN 494
            +        +  E R  R DGS  W     A LRS     +  D      V +I E+R 
Sbjct: 323 RRLRQGEMPVWQAEKRYLRSDGSPVWVELTAAVLRSTQGVAQCFDV----QVEDISERRR 378

Query: 495 ARKALEWSAAHDGLTGLANRQRF-DQHAQRLIENRPASLPAALVFIDLDHFKQVNDTGGH 553
            ++ +   A  D LTGL NR+   D+  Q L+  R       ++F+DLDHFKQVND  GH
Sbjct: 379 DQEKIRQLAYFDALTGLPNRRLLQDRLEQALLRARRHQQQVGVLFLDLDHFKQVNDVHGH 438

Query: 554 LSGDAMLRAAAAAIMSRVRSGDLAARIGGDEFALLLEQCTHEAAV-RVAEDIVASISAIA 612
             GD +L AAA  +   VR GD  AR GGDEF ++L +    A V R AE I+AS++A  
Sbjct: 439 EVGDELLSAAARRLTRCVRQGDTVARQGGDEFIVVLAEVGAPAGVIRAAETIIASLAA-- 496

Query: 613 LPWLSGSLH-----VGASIGVASLSQDIGSVDAWVDAADAACYAAKAAGRGVVR 661
            P+  G        + AS+G+A            +  AD A YAAK AGR   R
Sbjct: 497 -PYELGQARIRVDVITASVGIALFPAHGSDSQTLMKHADLAMYAAKQAGRNGYR 549



 Score = 42.4 bits (98), Expect = 6e-08
 Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 10/121 (8%)

Query: 357 GQVLRRVGVQRAELERL--NGEMFSKLRSVMRAAPIGIAFIRDR--RFELVSDELCRLLS 412
           G+ LR V  Q      L   G  FS+   +      GI FI DR  RFE V+   C +  
Sbjct: 115 GEELRAVTAQAFAHHALVRRGAQFSQ---IFENTSEGI-FILDREGRFETVNGAFCAITG 170

Query: 413 YREDELLGKPVDLIVVPEEDQPALAALEKEAFASSNSYVGEARMQRGDGSRFWARLRSRP 472
           Y E +++G+    +++P+  +P    +++   A    + GE  +QR DG  F A L   P
Sbjct: 171 YSEADIVGQDHHCLLLPQPGRPTPEFMQE--LADGGHWRGELWLQRRDGQVFPAALTLSP 228

Query: 473 V 473
           V
Sbjct: 229 V 229