Pairwise Alignments

Query, 351 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  115 bits (287), Expect = 1e-30
 Identities = 72/206 (34%), Positives = 109/206 (52%), Gaps = 4/206 (1%)

Query: 145 LPLTIGLAVVGLALAFPLALLLALGRRSGWPVVRTLSASYIELVRGVPLISVLFMASFLL 204
           L  T+ +A  GL  A  LAL LA  R    PV+  LS  YI   RG PL+  LF+  + L
Sbjct: 19  LGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFLLYYGL 78

Query: 205 PLLWPAGWQPDVLVRVLAGLTLFVAAYLAEIIRGGLQAVPRGQTEVAMALGFGRWPVQRD 264
           P ++P     D     + GLTL  AAY+AE IR  +  + R Q E ++++G       R 
Sbjct: 79  PQVFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSVGMTTSQAMRR 138

Query: 265 IVLPQALRLVVPALTNSVVGTLKDTSLVTVVGLFELTGALGLALGGDPTWRPFYLEGYLF 324
           I+LPQA R+ +P+L N  +  +K TSL   +G+ E+       +    ++R  + E +L 
Sbjct: 139 IILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAK--AQMEASSSFR--FFEAFLA 194

Query: 325 IAAVYWVLCFGLSRYSVWLEKRLSAA 350
           +A +YWV+   L+R   W E++L+ A
Sbjct: 195 VALIYWVVVLVLTRLQSWAEQKLNKA 220