Pairwise Alignments

Query, 351 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 219 a.a., amino acid ABC transporter permease from Methanococcus maripaludis S2

 Score = 99.8 bits (247), Expect = 6e-26
 Identities = 73/205 (35%), Positives = 110/205 (53%), Gaps = 8/205 (3%)

Query: 147 LTIGLAVVGLALAFPLALLLALGRRSGWPVVRTLSA-SYIELVRGVPLISVLFMASFLLP 205
           +T+ + ++   LA  +A+L+   R   +     L   +Y+E+ RG PL+  LF   + LP
Sbjct: 19  VTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEVFRGTPLLIQLFFIYYGLP 78

Query: 206 LLWPAGWQPDVLVRVLAGLTLFVAAYLAEIIRGGLQAVPRGQTEVAMALGFGRWPVQRDI 265
            +   G         + GL+L   AY++EIIR  +Q+VP GQ E A +LG G+      I
Sbjct: 79  SI---GITMSSTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQFEAAESLGMGKIESMVYI 135

Query: 266 VLPQALRLVVPALTNSVVGTLKDTSLVTVVGLFELTGALGLALGGDPTWRPFYLEGYLFI 325
           VLPQA R+ +P L NS    LK++SL++V+ + ELT    L      T RPF  E YL I
Sbjct: 136 VLPQAFRITIPPLVNSFSSILKESSLISVLAITELTRIGQLIY--TRTSRPF--EIYLTI 191

Query: 326 AAVYWVLCFGLSRYSVWLEKRLSAA 350
             +Y +L   +S  S  +EK+L+ A
Sbjct: 192 GLIYLILVSIISIGSWKIEKKLNGA 216