Pairwise Alignments

Query, 335 a.a., Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (262), Expect = 1e-27
 Identities = 82/250 (32%), Positives = 127/250 (50%), Gaps = 26/250 (10%)

Query: 70  DASQPFWRAFLAGLINTVRAAVPAAIFSVVLGTLIGIGRLAPHVLLRGICTAYVELLRNV 129
           D S P+   FL GL  T+R ++   + ++VLG+LIGI R      +R    A+V+L+RN+
Sbjct: 59  DGSLPY---FLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNI 115

Query: 130 PLLVQLLMLAFAMANLLPDPTEPVHLLPGVWLSKGGLSVPWPVAAEGGWWPTHFEWPERG 189
           P LV + +  F ++N L      + LL    L +   +   P+            W    
Sbjct: 116 PPLVFVFIFYFFISNQL------IPLLGLDELLRYHTAEVHPLIT----------W---- 155

Query: 190 NFGVSGGAALSPEYVTIVAGLTFYSAAFVAEIVRAGILSVSQGQVLAGQALGLSSGQQLR 249
              + G A L    ++ V  +   S+A++AEIVRAG+ ++ QGQ  A  +LGL +  + R
Sbjct: 156 ---LFGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYR 212

Query: 250 IVILPQALRVIVPSLTNQLLSLTKNSSLAVAVGYPELVSVANTTIGSNGRAFECIAIIMA 309
            VI PQ L  I P+L  Q +SL K++S+   +   EL  V +    S+G  FE   I+ A
Sbjct: 213 YVIAPQVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGA 272

Query: 310 VYLLLSLLIS 319
            YL+L L +S
Sbjct: 273 AYLVLCLTLS 282