Pairwise Alignments

Query, 335 a.a., Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 365 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 71/280 (25%)

Query: 66  WLDFDASQPFWRAFL----------------AGLINTVRAAVPAAIFSVVLGTLIGIGRL 109
           WL F    PF+ A L                 GL+ T+  A+   I S+ +G  + +GR 
Sbjct: 125 WLVFVNIYPFFAALLLYGGVFGLEVVETHKWGGLLVTLIIALVGIIASLPIGVALALGRR 184

Query: 110 APHVLLRGICTAYVELLRNVPLLVQLLMLAFAMANLLPDPTEPVHLLPGVWLSKGGLSVP 169
           +   ++R +CT Y+E+ R VPL+  L M +  +         P+ L  G  + K      
Sbjct: 185 SDMPIIRSLCTVYIEVWRGVPLITVLFMASVML---------PLFLSQGSEIDK------ 229

Query: 170 WPVAAEGGWWPTHFEWPERGNFGVSGGAALSPEYVTIVAGLTFYSAAFVAEIVRAGILSV 229
                                             +  + G+  +SAA++AE++R G+ ++
Sbjct: 230 ---------------------------------LLRALIGVVMFSAAYMAEVIRGGLQAI 256

Query: 230 SQGQVLAGQALGLSSGQQLRIVILPQALRVIVPSLTNQLLSLTKNSSLAVAVGYPELVSV 289
            +GQ  A  ALGLS  +++ ++ILPQAL++ +PS+ N  + L K++SL + +G  +++ +
Sbjct: 257 PKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGI 316

Query: 290 ---ANTTIGSNGRAFECIAIIMAVYLLLSLLISFGMNRYN 326
              ANT     G A E    +  V+     +  FGM+RY+
Sbjct: 317 GQSANTDPNWLGFATESYVFVALVF----WIFCFGMSRYS 352