Pairwise Alignments

Query, 345 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 364 a.a., extracellular solute-binding protein, family 3 (NCBI) from Rhodospirillum rubrum S1H

 Score =  259 bits (662), Expect = 7e-74
 Identities = 141/334 (42%), Positives = 190/334 (56%), Gaps = 1/334 (0%)

Query: 11  LAAASVIAFAAAAPAFAGKTLDAVKQRGTVKCGVTNGVAGFSAPDTQGNWSGLDVDTCRA 70
           LA  +  A A+   A  G TL  V++RG + CGV   + G  + D  G W G D+D CRA
Sbjct: 29  LAGRAEQAPASPISAAEGDTLRQVRERGYLTCGVNARLTGLGSVDPDGVWRGFDIDYCRA 88

Query: 71  IAAAVLGDGKKVDFVPLNSQQRFSALQAGEIDILARNTTWTLTRDASLGFNFTTITYYDG 130
           +AAA LGD  +V FVPL+ + R  AL +GE+D+L+RNTTWTL RDA  G +F  ++ +DG
Sbjct: 89  VAAAALGDSGRVRFVPLDIRSRLLALTSGEVDLLSRNTTWTLERDAGQGISFVGVSLFDG 148

Query: 131 QGFLVPKKLKVTSAKQLK-NATICTQSGTTNEKNVSDYFRAQGIPVKTVVFESFEASFKA 189
            G L  K L       L   A +C QS  T  + +     A G+    + F S E +  A
Sbjct: 149 PGLLAWKDLPGDDLASLPPTARLCVQSAATAARVLPARMAAAGLSFTILPFRSLEEARMA 208

Query: 190 FFSGRCQAFTTDASALAGLRNKEAPNPDDYVILPELISKEPLAPLVRRGDDEWFAIAKWV 249
            F+  C  +  D +ALA L   EAP PD   +LP+L++ EPL P VR GD  WF IA+W 
Sbjct: 209 LFTRACDGYVADRTALASLATFEAPRPDALRLLPDLLAVEPLGPAVRDGDANWFDIARWT 268

Query: 250 PNALIEAEEAGVTQANADELKANSKDPAQQRLVGTGEDLGKLLGLDKEWSFRAIKAVGNY 309
             ALI+AEE G++      +  +++DP  +R +G    +G  LGLD  W  R +  VG Y
Sbjct: 269 LFALIKAEEEGLSHDRLPAVLESTQDPELRRFLGLDPGVGAPLGLDDAWVRRIVSQVGTY 328

Query: 310 GEMFERNVGPKSVLKLPRGSNNLWSKGGLIYAPP 343
           GE+F+RN+G  S LKL RG N L   GGL+ APP
Sbjct: 329 GEVFDRNLGQGSPLKLERGPNALRRDGGLMVAPP 362