Pairwise Alignments

Query, 1171 a.a., Chromosome partition protein smc from Variovorax sp. SCN45

Subject, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

 Score =  205 bits (522), Expect = 2e-56
 Identities = 263/1270 (20%), Positives = 518/1270 (40%), Gaps = 199/1270 (15%)

Query: 3    LNSIKLSGFKSFAEPTNFLLPGQLVGVVGPNGCGKSNIMDAVRWVLGESRASELRGESMQ 62
            L+ I +  FKSF   +   +P     ++GPNG GKSN +D + +VLG++ A  LR     
Sbjct: 4    LSEIHMKNFKSFKN-SKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAGKFN 62

Query: 63   DVI--FNGTTTRKQASRSSVELVFDNADHRAGGQWNQFGEIAVRRVLTRDGTSSYYI--- 117
             +I   NG    K+ + + V L+FDN D +     ++ G   + R +  +G ++YY+   
Sbjct: 63   QLITYHNG----KRENFAEVTLIFDNKDRKMPVDSDKVG---ISRKVKINGDNNYYLIWN 115

Query: 118  -----------------NNQPVRRRDVQDVFLGTGLGPRAYAIIGQGTISRIIESKPEEL 160
                               + V++ ++ DV     L    + II QG + +II++ P E 
Sbjct: 116  EEKEVKENGEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNER 175

Query: 161  RLFLEEAAGVSKYKERRRETENRLGDTRENLTRVEDILRELNANLEKLEKQAEVAARYNL 220
            R  ++E +GV+++ E+  + +  L   RE + +++  + E+  NLEKL+K+ E A  +  
Sbjct: 176  RKIIDEISGVAEFDEKGEKAKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHVK 235

Query: 221  LQGDATKKQHQLWFLKRSESNADQAKIKADSEKAINDLESRTADLRRIESELETVRQAHY 280
            L  +    ++ L   K                     +E     L + + E+E +++   
Sbjct: 236  LTEELKATKYILTSKK---------------------IEFLNGILEKTKEEIEALKEMKV 274

Query: 281  GAGDQVNQAQGKLYEASAEVGRLEGEIRFVVEGRQRVEQRLVQLREQMGQWGRRREEAEA 340
                ++++   K  +    +  L  E+       ++  + +++L + + +        + 
Sbjct: 275  CFLKEISEYDAKSNDIRNRLQNLINELN------EKGNEEIMELHKSIKEM---EVTVDN 325

Query: 341  EIETLAGAGVDAEEQAILLAAQLEEHDARMPELEEAVQRAQDQANAQRTTVSQVQQQIQV 400
            + ++L GA  D +     + +Q E+    + E  + ++         RT   Q + +I  
Sbjct: 326  DKKSLNGALDDLKN----VNSQSEKKGQDLVETRQKIETI-------RTETLQKEAEINA 374

Query: 401  LAADQRNIEEQSRQLTQRSERLRADQNALAAPDEARLLDMQEQHAAAQEAASESDARLQE 460
            L  +  N+E + ++L  + E          +  +  +L  QE+  +          R+ E
Sbjct: 375  LKTEMENLETEKKKLKSKVEE---------SETQTEILKQQERKLSE---------RINE 416

Query: 461  LQETVPQLDDDRRARQQAVNTEGARHAEFSARLDALRALQEKVKTDGKLAPWLAKHGLDG 520
             Q  +    ++  A +  +N +    A+    ++ L+   E+++++ +    L K     
Sbjct: 417  SQNELYNFKNEFNALENEINKKSFNLAKNKETIETLQKELEEIRSEHEDTKSLYKE---- 472

Query: 521  LQGLWSRIHIEQGWESALEAALRERLGALEVSRLDMVRAFGNDAPPAKLAFYSPPAA--- 577
            L+ +   +   +     L    +E    L+ S  D ++          +  +S   A   
Sbjct: 473  LEDVAVELEYSKKKVVTLLENKKEYQDRLDKSHADYIKENAKIKAMKDMEDFSLDRAVKS 532

Query: 578  -------GVPESAAALPRLSSLLR--LNDAGQQAL----LTGWLHGCYTADSFEEALAQR 624
                   GV + A  L +  +  +  + +AG   L    +     G       ++    R
Sbjct: 533  VLEAKLPGVVDIAGNLGKTDAEYKTAIENAGGNRLNYIVVKRMDDGARAIQYLKKNNLGR 592

Query: 625  ATLQPGEVIYVKSGHAVSSHSVNFYAPDSEQAGMLARQQEMENLERQLRAQTLINEEART 684
             T  P + I       +    V   A D     ++  + E ENL R +   T+I E    
Sbjct: 593  TTFLPLDRINGPEALYLDDEGVVGRAID-----LVEFKPEHENLFRYVFGNTIIVEN--- 644

Query: 685  ALVRAEAAYADAAQRLVTARREAAET----------QSRAHELQVETLRMTQLAEQTRAR 734
             L  A+    D   R VT   E  E           +    ++ ++T ++ +LAE     
Sbjct: 645  -LDYAKTLSKDHRARFVTLEGEVIEPSGAMIGGRSRKKSVIKVDIDTSKLEKLAEDI--- 700

Query: 735  SQQLAADLGEVDAQLEELQERRISAEGRFEELDMQLADSQERHAELDERVIEAGRALNAS 794
              +L   L E   ++E LQ +  +   R  EL+ +L   ++   + +  +   G  +   
Sbjct: 701  -SELDGTLSETKDEIERLQNKNATYSTRKMELESRLKIIKDLEHKKEGILTNNGVKIKEL 759

Query: 795  REQHRSLERQAQEATFSQRTLEARRGELNRSI-------ETAAQQVVSLTDEDERARAEL 847
              + R LE +      S+  LE +  E  + I       +  ++++ S  + +   R ++
Sbjct: 760  ELESRKLEEELDYLEGSKEELERKIEEFTKKISGFTSQRDRISEEIASFENSEHSKRIKV 819

Query: 848  --------SRLSDAAAQAGLQDALALK-----------------------LEREAA---- 872
                     +  +       +DA+ +K                       LE+       
Sbjct: 820  IDENIIAFEKKKNEFENEIKRDAVLIKEVLIPKISELNSNIKELSEKRTILEQNIQFYKN 879

Query: 873  --------LGSARSQYDDLTLKLRASDERRLQLERELDPLRQ-------RITEFQLKEQA 917
                    L + + +Y+DLT  LR   E++   E+EL+ L         RI + + +  +
Sbjct: 880  NVEKNFEILKNKKERYEDLTKDLRELTEKKEAFEKELEILNGEKRRVYGRINQNESQINS 939

Query: 918  ARLGVEQYQQLLDDAGADL---EAIEQSIE--TDKVR---LTGLQSEIDRLNREVVALGA 969
              +   +Y+  L++    L   E IEQ  E  T K++   +  L+S    L   +  L  
Sbjct: 940  LSIDKAKYETRLEEEDRKLYVCENIEQISEDITSKIKEFDVDALESHQIDLEGHIKKLEP 999

Query: 970  VNLAALDELAIASERKIFLDAQSADLNEAIGTLEDAIRKIDAETRDLLGGTFKIVNDHFS 1029
            VN+ A+D+     +R   L  +  D           I ++    +++    +  V +++ 
Sbjct: 1000 VNMRAIDDYQYIVDRYDELFEKRTDYENEEKKYLHLIEEVSKRKKEVFMDVYLKVAENYE 1059

Query: 1030 RMFPELFGGGNAKLMMTGDEILDSGVQVMAQPPGKKNQTIHLLSGGEKALTAIALVFAIF 1089
            +++ E+ G G   L    D     G+ + A P  KK Q++ ++SGGEK+LTA+A +FAI 
Sbjct: 1060 KIYTEIGGSGKLSLENPEDPF-SGGLLIDASPMNKKLQSLDVMSGGEKSLTALAFLFAIQ 1118

Query: 1090 QLNPAPFCLLDEVDAPLDDANTERYAKLVTAMSRETQFLFISHNKIAMEMAEQLIGVTMQ 1149
             LNPAPF +LDEVDA LD  N     +++   S+++QF+ ISH +  +  ++ + GV M 
Sbjct: 1119 HLNPAPFYVLDEVDAALDTKNAGLIGEMIKNASKDSQFIVISHREQMISKSDVMYGVCM- 1177

Query: 1150 EQGVSRIVAV 1159
            E G+S++V +
Sbjct: 1178 ENGLSKLVGL 1187