Pairwise Alignments

Query, 385 a.a., Macrolide-specific efflux protein MacA from Variovorax sp. SCN45

Subject, 421 a.a., multidrug efflux system transmembrane protein from Sinorhizobium meliloti 1021

 Score =  277 bits (709), Expect = 3e-79
 Identities = 158/380 (41%), Positives = 232/380 (61%), Gaps = 11/380 (2%)

Query: 2   PNTQPRRSRK----YFIGILVLVVLGLVAFVGLSPARKPE--YLTASVQRTDLENAVLAT 55
           P T PR+ R+    +   +LVL V+G   +        P    +T +V R D+E +V A 
Sbjct: 22  PVTPPRKKRRSRRPWIFALLVLAVVGTGYYAWSRQGAPPATTVITQAVTRGDIEESVTAV 81

Query: 56  GVLQALKQVEVGAQVSGQLKSLKVVLGQTVKKGDWLAEIDPVISQNTLAQEQAKLDNLQA 115
           G L A+K V+ GAQVSGQLKSL V +G  V++   +AEIDP   +N +  ++A+L NL+A
Sbjct: 82  GTLDAVKSVDAGAQVSGQLKSLHVGIGDKVEQNQLIAEIDPASIENRIEIDEAELANLEA 141

Query: 116 QKLAKEVRIRQAQLSWTRQQEMLAQDAAAKQDMESADAELRALRADGVSLDAQIRQQRLA 175
           Q ++K+ ++   Q +  RQ+ ++A ++ ++  ++ A A+  A  AD  +++AQIR+Q+  
Sbjct: 142 QLVSKKAQLVLKQSNIERQRNLVATNSVSQSTLDQAVADHAAAGADVQAIEAQIRKQKAT 201

Query: 176 LASAQTNLSYTRIVAPIDGDVVSISTLEGQTVVASFQVPTLMKLADLSTMTVKAQVSEAD 235
           LA  + +L YT+I AP+ G +V     EGQT+ A+   PT++ +ADLSTMTVKAQVSEAD
Sbjct: 202 LAGDRVDLGYTKIYAPMAGTIVDDPAKEGQTLNANQTTPTIVTIADLSTMTVKAQVSEAD 261

Query: 236 VVRVKAGQPVYFTILGDPDKRYYGTLRAVQPSPEKINNAVFFNALFDVPNPDRTLRVDMT 295
           V ++K G   YFT+LG P KR+ G LR ++P P+  NN V + ALFDVPNP   L + M+
Sbjct: 262 VGKLKLGMDAYFTLLGQPGKRFTGKLRQIEPMPDTENNVVLYYALFDVPNPTGELMMSMS 321

Query: 296 AQVAIMLGEAKQALVVPLTALGT-----RDKDGRQEVRVLKADQSVEKRMVRVGISNNFQ 350
           AQV  +   AK  LVVP  AL T      D   R EV V+    + + R V VG+ N   
Sbjct: 322 AQVFFVQAAAKNVLVVPSAALRTVEAAASDGPARAEVTVVAPSGATQTRTVEVGVRNRVS 381

Query: 351 AQVLEGLKEGDKVITGDASA 370
           A+++ GL+EG+KV+   ASA
Sbjct: 382 AEIVSGLQEGEKVVVDAASA 401