Pairwise Alignments

Query, 385 a.a., Macrolide-specific efflux protein MacA from Variovorax sp. SCN45

Subject, 391 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score =  230 bits (587), Expect = 5e-65
 Identities = 147/370 (39%), Positives = 207/370 (55%), Gaps = 13/370 (3%)

Query: 2   PNTQPRRSRKYFIGILVLVVLGLVA--FVGLSPARKPEYLTASVQRTDLENAVLATGVLQ 59
           P    RR+    +G+L    LG  A  + G +  + P     +V+   +ENA+ A G LQ
Sbjct: 9   PRRPSRRTLVLILGLLAACALGAWALGWFGANGDKAPPPRQQTVELGSVENAITAVGSLQ 68

Query: 60  ALKQVEVGAQVSGQLKSLKVVLGQTVKKGDWLAEIDPVISQNTLAQEQAKLDNLQAQKLA 119
               V+VGAQVSG++  L VV+G  V+KGD L  IDP   +  +  ++A L  L A +  
Sbjct: 69  PKTYVDVGAQVSGKVSHLPVVIGDRVEKGDLLTVIDPRTYEARVRTDKAALAKLHADR-- 126

Query: 120 KEVRIRQAQLSWTRQQ----EMLAQDAAAKQD-MESADAELRALRADGVSLDAQIRQQRL 174
              R  +AQL  +RQQ    E L Q  A  QD ++SA   +   +A   S+DAQI Q   
Sbjct: 127 ---RKAEAQLGLSRQQRARTERLFQAKATSQDSLDSARTTVLVDQAAIESIDAQIEQALA 183

Query: 175 ALASAQTNLSYTRIVAPIDGDVVSISTLEGQTVVASFQVPTLMKLADLSTMTVKAQVSEA 234
            L + Q +L YT++ A + G +VSI+ +EGQT+ +    P LM++ADL TMTVKA+V+EA
Sbjct: 184 ELDADQADLDYTQVYATMSGTIVSIAVVEGQTLNSVQSAPDLMRIADLDTMTVKAEVAEA 243

Query: 235 DVVRVKAGQPVYFTILGDPDKRYYGTLRAVQPSPEKINNAVFFNALFDVPNPDRTLRVDM 294
           D+  +K G P YFT LG   +R+ GT+R ++P+P   N+ V +N L DV NPD  L  DM
Sbjct: 244 DITAIKPGMPGYFTTLGGGGRRWQGTVRLIEPTPVTDNDVVLYNVLMDVANPDGALMTDM 303

Query: 295 TAQVAIMLGEAKQALVVPLTALGTRDKDGRQEVRVLKADQSVEKRMVRVGISNNFQAQVL 354
           TAQV  +   A+   VVPL AL      G     V +    +E+R V  G+ N   AQV+
Sbjct: 304 TAQVFFLKDRAENVPVVPLAALTPTATAGTWTASV-QGPGGLEQRTVTTGVVNRALAQVV 362

Query: 355 EGLKEGDKVI 364
           +GL  GDKV+
Sbjct: 363 DGLAVGDKVV 372