Pairwise Alignments

Query, 243 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 220 a.a., ABC transporter for D-Glucosamine Hydrochloride, permease component 2 (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  105 bits (262), Expect = 7e-28
 Identities = 62/187 (33%), Positives = 100/187 (53%), Gaps = 2/187 (1%)

Query: 24  LGGAALTVLLSVGSAVASAVLGLAWGIGLASARGWARAVLTLALAFFRAIPVLMLIFWTY 83
           L G  L + L++ S     V+GLA    L S     R + ++ +   R  P+L+LI   Y
Sbjct: 18  LAGLGLGLSLALVSIAIGCVIGLAMAFALLSKHRVLRVLASVYVTVIRNTPILVLILLIY 77

Query: 84  FLLPFALGISVPGVLSVMCALSLVGGAYLAHAVNAGIRGVGQGQWAAGLSLGLTRWGTLR 143
           F LP +LGI +  + S +  LSL  GAYL      G+  + +GQ  AGL++GL  W    
Sbjct: 78  FALP-SLGIRLDKLPSFVITLSLYAGAYLTEVFRGGLLSIHKGQREAGLAIGLGEWQVKA 136

Query: 144 FIVLPQALRMMLPSFVNQWVTLVKDSSLAYIVGVGELSFVASQVNARTMVYPAEIFMLVG 203
           ++ +P  LR +LP+  N +++L KD+SLA  + V EL++ A ++N  +     E +++  
Sbjct: 137 YVTVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKINVES-YRVIETWLVTT 195

Query: 204 AIYWLLC 210
           A+Y   C
Sbjct: 196 ALYVAAC 202