Pairwise Alignments

Query, 243 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 228 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  110 bits (274), Expect = 3e-29
 Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 2/200 (1%)

Query: 24  LGGAALTVLLSVGSAVASAVLGLAWGIGLASARGWARAVLTLALAFFRAIPVLMLIFWTY 83
           L G AL++ L+  + +A  V+GL    GL S R   R    L +   R  P+L+L+ ++Y
Sbjct: 26  LEGLALSLGLAFVAILAGCVIGLITAFGLISRRALLRKPAGLYVTVIRNTPILVLVLFSY 85

Query: 84  FLLPFALGISVPGVLSVMCALSLVGGAYLAHAVNAGIRGVGQGQWAAGLSLGLTRWGTLR 143
           F LP  LG+ +  + S +  L++  GAYLA     G+  +  GQ  AGL++GLT      
Sbjct: 86  FALP-ELGVRLGKIESFVATLAIYSGAYLAEVFRGGLIAIPPGQREAGLAIGLTEMQIRT 144

Query: 144 FIVLPQALRMMLPSFVNQWVTLVKDSSLAYIVGVGELSFVASQVNARTMVYPAEIFMLVG 203
            I++P  LR +LPS  +  ++L KD+SLA  + V EL+F A ++N  T     E +++  
Sbjct: 145 SIIIPLMLRSVLPSLGSTMISLFKDTSLAAAIAVPELTFEARKINVETF-RVIETWIVAS 203

Query: 204 AIYWLLCTGLDRLANMAVRR 223
            +Y   C+ L  L   A RR
Sbjct: 204 CLYVATCSLLAALMRAAERR 223