Pairwise Alignments

Query, 243 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 224 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Dechlorosoma suillum PS

 Score =  123 bits (309), Expect = 3e-33
 Identities = 84/235 (35%), Positives = 127/235 (54%), Gaps = 24/235 (10%)

Query: 3   MIETLWDSLPYLLWGAFPQGPLGGAALTVLLSVGSAVASAVLGLAWGIGLASARGWARAV 62
           M E  W S+P  L       PL G  L V L V   + + V+G+ WG  LA AR  +  +
Sbjct: 1   MYEFDWSSIPGAL-------PLLGKGLLVTLEV--TLTAIVVGIGWGTLLAVARLSSNRL 51

Query: 63  LTLALA----FFRAIPVLMLIFWTYFLLPFAL------GISVPGVLSVMCALSLVGGAYL 112
           L+   A     FR++P++M+I W Y ++P AL       I    ++S + A +L   AY 
Sbjct: 52  LSFLAAGYVNLFRSVPLVMVILWFYLIVPQALKGLFGQDIGDIRLVSALVAFALFEAAYY 111

Query: 113 AHAVNAGIRGVGQGQWAAGLSLGLTRWGTLRFIVLPQALRMMLPSFVNQWVTLVKDSSLA 172
           +  + AGI+ V +GQ AAGL+LGLT   T+R +VLPQA R M+P  + Q + L +D+SL 
Sbjct: 112 SEIIRAGIQSVPKGQVAAGLALGLTPGQTMRLVVLPQAFRNMIPLLLTQAIILFQDTSLV 171

Query: 173 YIVGVGELSFVASQVNARTMVYPAEIFMLVGAIYWLLCTGLDRLANMAVRRAQAR 227
           Y++G+ +    A +V  R      E+ +  GA Y+++C  + RL    V+  QAR
Sbjct: 172 YVIGLSDFFGTAYKVGDRDGRL-VELLLFAGAAYFVICFTVSRL----VKHLQAR 221