Pairwise Alignments

Query, 277 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 271 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  117 bits (294), Expect = 2e-31
 Identities = 86/266 (32%), Positives = 139/266 (52%), Gaps = 13/266 (4%)

Query: 5   KFIVTSLALAIGSFTLGGAAWADRLDDVRKAGVLRVAAFDGNPPFGYIDPASKKQVGHDI 64
           +  ++ L  AI +  +  AA A  ++ ++ AG ++V      PPFG +D A+ +  G+D 
Sbjct: 12  RIAISVLGAAIVAGLVAPAA-AQTVETIKSAGTVKVGMLVDFPPFGIMD-ANNQPDGYDA 69

Query: 65  DLATEFAKSLGVKIELVPTNPANRIPLLTSGKVDVVFASFTITDERAKAVDFTTPY--FL 122
           D+A   AK LGV++ +VP    NRIP L S +VD++ AS  IT+ERAK VDF+ PY    
Sbjct: 70  DVAKLLAKELGVEVTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAKNVDFSQPYAGIS 129

Query: 123 VGQQFLAKKGVLKDAAQIKDIRIGTEKGTTMESNLRKNYP-DAKVVLYDDSPFALAALRN 181
           +G    A   V K    +    IG  + +T ++   K  P DA +  +DD   A+ AL +
Sbjct: 130 IGVFGAADLAVTK-PEDLAGKTIGVARASTQDTATTKIAPQDANIQRFDDDASAVQALLS 188

Query: 182 GNVQAITNDGVKLTAQWNAIPDKEKYEIPPITVSKEYLGAAVPKGEARLLEALNTWLVDS 241
           G V+ I    V       A P +   +   + +S++  G AV KG + +L+ +N +L   
Sbjct: 189 GQVELIGVSNVVAAQIEAAAPGRFNQK---LQLSQQVQGIAVRKGSSEMLKFVNGFLDKV 245

Query: 242 EKNGRALAIYDTWFGPNSKAPLPRLL 267
           + +G+  AI++ W G    +PLP  +
Sbjct: 246 KADGQLNAIHEKWLG----SPLPEFV 267