Pairwise Alignments

Query, 281 a.a., Alkanesulfonate ABC transporter permease protein SsuC from Variovorax sp. SCN45

Subject, 261 a.a., ABC-type nitrate/sulfonate/bicarbonate transport system, permease component from Pseudomonas stutzeri RCH2

 Score =  348 bits (892), Expect = e-101
 Identities = 169/254 (66%), Positives = 203/254 (79%)

Query: 27  NVAKRLVPWLVPVGLIVFWQIASSLGWLSTRVLPAPVDMVKAAWNLTVSGELWTHVKVSA 86
           ++ +RL PW +PV L+  WQ A   G LSTR+LP P  ++ A W+L  SGELWTH+ +S 
Sbjct: 5   SLGQRLAPWALPVALLAAWQGAVVFGLLSTRILPGPSAVLAAGWDLLGSGELWTHLTISG 64

Query: 87  GRALAGLAIGGGAGLALGLLTGSVKFAETLLDSTIQMVRNIPALALIPLVILWFGIDESA 146
            RA  G AIGGG GL LG +TG   + E LLDS++QM+RN+P LALIPLVILWFGIDESA
Sbjct: 65  WRAGIGFAIGGGIGLLLGFITGLSTWGERLLDSSVQMIRNVPHLALIPLVILWFGIDESA 124

Query: 147 KLFLISVSVFFPIYLNTFHGIRNVDPQLIEMGRTYGLSRWQLYREVILPGALSSILVGLR 206
           K+FL+++   FPIYLNT+HGIRNVDP L+EM R+YGLS + L+R+VILPGAL SILVG+R
Sbjct: 125 KIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFALFRQVILPGALPSILVGVR 184

Query: 207 FSLGLMWVILIVAETISAQAGIGYLTMNAREFLQTDIVLVGILLYALLGKLADLFARGLE 266
           F+LG MW+ LIVAETISA AGIGYL MNAREFLQTD+V++ ILLYALLGKLADL AR LE
Sbjct: 185 FALGFMWLTLIVAETISASAGIGYLAMNAREFLQTDVVVLAILLYALLGKLADLAARSLE 244

Query: 267 QWWLRWHPGYQRKA 280
           + WLRWHP YQ KA
Sbjct: 245 RAWLRWHPAYQVKA 258