Pairwise Alignments

Query, 291 a.a., Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) from Variovorax sp. SCN45

Subject, 255 a.a., dihydroorotate dehydrogenase electron transfer subunit from Methanococcus maripaludis S2

 Score = 77.4 bits (189), Expect = 3e-19
 Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 26/238 (10%)

Query: 56  KPGQFYQLRCPQTQDSQPFLLRPMSVYGMGPEAGAIEFLYNVTGAGTRALASLEVGGHMD 115
           KPGQF  +  P+  D +PF     +   +              G  T  + SL+ G  + 
Sbjct: 31  KPGQFAMVWIPEI-DEKPFGFSSKNSISIAK-----------VGKFTEKIHSLKKGDLLG 78

Query: 116 IVGPLGNTFAMEPDFERILVVARGVGLATMAPLLQQAAKAGVKITAVMSARAPKDLMRDE 175
           I GP GN F  E    +IL VA G+G A +   ++  +K GV+IT+V+  R   +L+  +
Sbjct: 79  IRGPYGNNF--ECIGTKILAVAGGIGSAPVISAVEAFSKLGVEITSVIGGRTKDELLFLD 136

Query: 176 FLRGIDADVHCVYDSDGSSSVEAMDVLLRRLLDAARHDVVYTCGSHRILMLLQRVLE--D 233
                     C  D          + +L  LL+  + D+V TCG     +++++V+E  +
Sbjct: 137 RFEKCGKTFACTDDCSFGFGGFTTEKMLELLLE-EKFDMVITCGPE---IMMKKVVEIAE 192

Query: 234 YPHTRGEVAMEQRMACGMGVCLSCVRLFDKDGDKQFLRVCREGPVFSIRDVVGEVEFG 291
             +   +V++E+ M CG+G+C  C        D + L VC++GPVF    +    EFG
Sbjct: 193 QNNIPIQVSLERYMKCGIGICGQCA------VDDEGLCVCKDGPVFWSDKLKFVSEFG 244