Pairwise Alignments

Query, 333 a.a., Transcriptional regulator RpiR in protein degradation cluster from Variovorax sp. SCN45

Subject, 278 a.a., MurR/RpiR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 56/220 (25%), Positives = 91/220 (41%), Gaps = 17/220 (7%)

Query: 23  LTRSHRQVADYVLEHPLQVATLPIDELAAVVGVSVATANRFARALEFDGYATFRAELVRG 82
           L++  R VADYVLE+  +V    I +LA     S AT  R  R L + GY+ FR  L   
Sbjct: 18  LSKKLRVVADYVLENAHEVQYQTITDLAFNTKTSEATVVRLCRDLGYKGYSDFRMALAVD 77

Query: 83  FEPLVAPVERMRGNLERPTTVAEVFATALDESRRNIEATRQTLDYAACEAAVERIGKARS 142
                        N  +P    ++   +   +  ++  T + +D AA     E +  A+ 
Sbjct: 78  LS--------QSANQSQPKMDGDICEVSAQSAVDSLMDTAKLIDRAALNRICELVHGAKF 129

Query: 143 IYIAGFGASAWLAGLLQHGLDGSCNDVRLLSSVSGVTHSARTLMHAGPQ---DLFIGLTF 199
           I   G GAS+ +   L + L      VR+         +    M AG     D +  ++ 
Sbjct: 130 IGCVGVGASSIVGRYLAYRL------VRIGKKAIMYEDTHLAAMSAGQSVVGDAWFAISS 183

Query: 200 PRYLTDTVALAQIARGQGCALLALTDRPSSPLAPLADVAL 239
                + V  A  A  +G  +++LT+   SPL+ ++D  L
Sbjct: 184 SGSTKEVVHAATQAHQRGVPVVSLTNISHSPLSSISDEML 223