Pairwise Alignments

Query, 333 a.a., Transcriptional regulator RpiR in protein degradation cluster from Variovorax sp. SCN45

Subject, 284 a.a., DNA-binding transcriptional regulator HexR (RefSeq) from Shewanella amazonensis SB2B

 Score = 70.1 bits (170), Expect = 6e-17
 Identities = 67/282 (23%), Positives = 129/282 (45%), Gaps = 22/282 (7%)

Query: 14  QRIAQALPRLTRSHRQVADYVLEHPLQVATLPIDELAAVVGVSVATANRFARALEFDGYA 73
           +++ ++L + ++S R+VA+ +L  P       I  LA +  VS  T NRF R L+  G+ 
Sbjct: 5   EKVQKSLNQFSKSERKVAEVILASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDTKGFP 64

Query: 74  TFRAELVRGFEPLVAPVERMRGNLERPTTVAEVFATALDESRRNIEATRQTLDYAACEAA 133
            F+  L +        V R   ++E   +         + S  +++  RQ+LD  A   A
Sbjct: 65  DFKLHLAQSLANGTPYVSR---HVEEDDSPESYTTKIFESSMASLDTARQSLDMQAINKA 121

Query: 134 VERIGKARSIYIAGFGASAWLAGLLQH-----GLDGSCNDVRLLSSVSGVTHSARTLMHA 188
           V+ + +A++I   G GASA +A   Q+      +   C D  L+  +S         +++
Sbjct: 122 VDILTQAKTISFFGLGASAAVAHDAQNKFFRFNVPVICFDDVLMQRMS--------CINS 173

Query: 189 GPQDLFIGLTFPRYLTDTVALAQIARGQGCALLALTDRPSSPLAPLADVALYCQTETS-- 246
              D+ + ++        + +A++AR  G A++ +T R +SPL+    +++  +      
Sbjct: 174 NEGDVVVLISHTGRTKSLIDIARLARENGAAVIGITAR-NSPLSVECTLSVTMEVPEDTD 232

Query: 247 -YRPNC-ETSVLALIEALTSAVAL-RAPDPVQSAGRILQAVR 285
            Y P     + L +I+ L +   L R P    S  R+ +A++
Sbjct: 233 MYLPMASRLAQLVVIDVLATGFTLRRGPRFRDSLKRVKEALK 274