Pairwise Alignments

Query, 645 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 666 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  112 bits (280), Expect = 5e-29
 Identities = 147/640 (22%), Positives = 266/640 (41%), Gaps = 61/640 (9%)

Query: 17  LSVLRDPEGRLSADE---AAADSAWKPLPGAV-NAGYTSDILWLRLSVQ-RP--VDAPAQ 69
           + V  DP G    ++    A +S ++P   AV NAGY+  + W+R+ +  RP  V    +
Sbjct: 34  MQVFEDPLGEARIEDITSTAFESRFQPHQNAVFNAGYSRSVHWVRVDLNYRPQTVQGARR 93

Query: 70  WLAQFSNALLDDVRLYRQDASGQWQLAMQSGEDMGRSNWPVDARNVQLPLTLQSADPTPL 129
           WL + +   LD ++LY  D  G ++LA  +G+    ++  +   N    + LQ   P   
Sbjct: 94  WLLEVAYPPLDSLQLYLADGQGGYRLAGDTGDTKPWASREIRQGNYLFEIELQPNQPQRA 153

Query: 130 LLRIRTRNAMSTTLGFATPEVYAGTARREYLFYGLGFGFGLMLIAFHSLFWQMTRERVSA 189
            LR+ +  ++   L   +   Y           G+ +G  L ++ ++   +   R++   
Sbjct: 154 YLRVASEGSIQVPLSLWSQHAYLEAQPGRIYVLGMIYGVLLAMLVYNLFIYVSIRDQSYL 213

Query: 190 WYLLYVSNALLVEFLTAGLPQQLFDMPSR--LSDAMASLTICAGLAIGIRF--AVMQLGA 245
           +Y+LY++   L +    G   Q F  P R   ++A   L I A    G  F  + ++   
Sbjct: 214 FYILYIAAFGLYQVSVNGAGVQ-FLWPDRPWWANAATPLLIGATGLFGCLFTRSFLRTAE 272

Query: 246 DLRWPRFTGVVMHGVTLLCLVAAALVLGGHNGPAMLLIQPVAMLCILWLVGSALWLLPRD 305
             RW      ++ G +++ +V   L L    G ++ L   +A+L  L +  + +    R 
Sbjct: 273 HSRWMDRLLRLIIGFSVVVMV---LALTTDYGLSLRLATALALLFTLAVFAAGILAWLRG 329

Query: 306 EGQARAFLLIFGIYYAGVLASFVRNLGWLPANVWTNNATALGTLLHLLLMSMRLNRRYDQ 365
              AR F++ +     G   + +  LG LP N  T  A+ LG  L ++L+SM L  R + 
Sbjct: 330 MRVARYFIIAWSALLIGGQINTLMVLGHLPHNFLTMYASQLGAALEVVLLSMALADRINA 389

Query: 366 LRREKEAAQERLVQVVGRHNDRLEEEVRTRTADLRGEIEQRQRLEADLRAALETERRAKQ 425
           L+ E+                ++ E  R+    L  E+ +  RL+               
Sbjct: 390 LKDERA---------------KILESARSDLEQLNRELAESNRLKD-------------- 420

Query: 426 SQVDFVAMVSHEFRTPLAIINTTAQQIAKNLDAAREKTLARCLNLRAAAQRMTALVDEYL 485
              +F++ +SHE RTP+  +   A ++    +   E    + +    +A+ M  LV+  L
Sbjct: 421 ---EFLSNISHELRTPMMGV-MGALELLPASETPEELQQYQHI-ATGSARDMMRLVNNIL 475

Query: 486 TADRMEAGQTPFQ-PRVCEREELMELFEDLAADWPDGRVVLQ---DHQLPRQLVCDPGLL 541
               + AG+   Q  R   RE    L +  A    +  +      D QLP ++  D   L
Sbjct: 476 VLSELRAGKLRLQDQRFSLRETAARLHQQFAPLAREKGLAFDLDFDEQLPDRVYGDAEKL 535

Query: 542 RVALRNLLANADRHTPADRAIAL---DVIPAEETGLRIRVSNPGDEIPPDEVSRLFEKYF 598
              + +LL NA + T A  A+ L     +   +  L + V + G      + + L+ ++ 
Sbjct: 536 EQCICHLLDNAVKFT-ARGAVNLRFTGAVEPRQLQLNVEVIDSGIGFSDADQAFLYHQFR 594

Query: 599 R--GRKAAQSPGAGLGLYLVHQIAELHRGEARLESAGQDG 636
           +  G    +  G G+GL +   + EL  G  RLE   + G
Sbjct: 595 QVDGSMTRRYGGLGIGLAISRGLIELLGG--RLEQQSRPG 632