Pairwise Alignments

Query, 645 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 635 a.a., histidine kinase from Klebsiella michiganensis M5al

 Score =  106 bits (264), Expect = 4e-27
 Identities = 149/635 (23%), Positives = 258/635 (40%), Gaps = 63/635 (9%)

Query: 27  LSADEAAADSAWKPLPGAVNAGYTSDILWLRLSVQRPVDAPAQWLAQFSNALLDDVRL-Y 85
           L A  +    A K  P   + GY+S   WLR S+     A  Q   Q   + +D + + Y
Sbjct: 39  LDAFLSLPQEALKTAPLIPSFGYSSKTYWLRTSLPAAWFAGEQRWLQLGPSFVDRLSVFY 98

Query: 86  RQDASGQWQLAMQSGEDMGRSNWPVDARNVQLPLTLQ-SADPTPLLLRIRTRNAMSTTLG 144
           R   S       + G+     +  +D R   L L    +A    ++ R+++ + +     
Sbjct: 99  RPCGSDAPWKQKEFGDHASARDNDLDYRESVLILPPPPTAAGYEMVFRLQSTSTLILLAT 158

Query: 145 FATPEVYAGTARREYLFYGLGFGFGLMLIAFHSLFWQMT--RERVSAWYLLYVSNALLVE 202
            ++P+ +  +A  +  F+   F FGL +IA     W     R R+     L+  N  LV 
Sbjct: 159 LSSPQEFVRSATLDTAFWS--FYFGLAVIASGIALWLAVALRRRLLWGICLFSLNYPLVA 216

Query: 203 FLTAGLPQQLF-DMPSRLSDAMASLTICAGLAIGIRFAVMQLGADLRWPRFTGVVMHGVT 261
            L  G P+ LF D    + D M S       A  +             PR   +++  + 
Sbjct: 217 ALH-GYPEWLFGDALLPVQDYMISCLSLVSYATALWLHSEVFDLKKNMPRLHQLLLAAIA 275

Query: 262 LLCLVAAALVLGGHNGPAMLLIQPVAMLC--ILWLVGSALWLLPRDEGQARAFLLIFGIY 319
           L  ++  ++ LG + G AM +   +  +   IL +    LW     +       L+  +Y
Sbjct: 276 LNIVLQISIPLGFY-GQAMQIEAGIFFIAAPILLITSWMLWRRKAVDINTLLLGLLPPVY 334

Query: 320 YAGVLASFVRNLGWLPANVWTNNATALGTLLHLLLMSMRLNRRYDQLRREKEAAQERLVQ 379
                 + +   G +P +    +      ++H++ +                     ++ 
Sbjct: 335 VVSAGLALLSIHGVIPFHNMVYSTWQYALIIHIVTVL--------------------IIA 374

Query: 380 VVGRHNDRLEEEVRTRTADLRGEIEQRQRLEADLRAALETERRAKQSQVDFVAMVSHEFR 439
           V+     R+  E RT        + ++Q+L  +L    + ER A   Q  F+ MV+HEFR
Sbjct: 375 VL-----RVRAENRT--------LVRKQQLAREL----QIEREASFHQRQFMGMVAHEFR 417

Query: 440 TPLAIINTTAQQIAKNLDAAREKTLARCLNLRAAAQRMTALVDEYLTADRMEAGQTPFQP 499
           TPLAI+    +   + L  A      R   ++ A  R+  L D  L   R+ +       
Sbjct: 418 TPLAILQAALEN--QRLSPATVTQSLRLDRMQRATTRLVQLTDNCLADARLSSRDLHADK 475

Query: 500 RVCEREELMEL---FEDLAAD-----WPDGRVVLQDHQLPRQLVCDPGLLRVALRNLLAN 551
           +  E   ++ +     DL+ +       +G+ V      P  L  D GLL +A+ NLL N
Sbjct: 476 QDAELLPVIHMAATVVDLSLNHYLNVTLEGQTVGPQSPSP-VLFIDSGLLCIAIANLLDN 534

Query: 552 ADRHTPADRAIALDVIPAEETGLRIRVSNPGDEIPPDEVSRLFEKYFRGRKAAQSP-GAG 610
           A ++  A   I +++   +E  + +R+ + G  IPP++V  ++E+Y RG     +P G G
Sbjct: 535 AVKYAAAGE-IRIEIY-QQEKHVELRIGDRGPGIPPEQVEHIYERYRRGETHTTTPAGTG 592

Query: 611 LGLYLVHQIAELHRGEARLESAGQDGQVRFSLALP 645
           LGLY+  QI + H G+  L      G   F+L LP
Sbjct: 593 LGLYVARQIIQAHGGDLWLAENSSAG-CEFALTLP 626