Pairwise Alignments

Query, 230 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

 Score =  103 bits (256), Expect = 4e-27
 Identities = 73/226 (32%), Positives = 116/226 (51%), Gaps = 7/226 (3%)

Query: 4   VILLEDEAVLREELSEFLAGNGYRVDAEASLEGFRRSYDPARHGIALVDLGLPDGDGLVL 63
           V++++D+A LR  L  +L+  G++V + A+ E   R        + ++DL LP  DGL +
Sbjct: 7   VLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPGEDGLSI 66

Query: 64  IRELRERGERLGIVVLTARGGARDRVTGLDIGADYYLSKTSDLDELAATL-AALSRRLGD 122
            R LR     + I++LTA+G   DR+ GL++GAD YL K  +  EL A + A L R++ +
Sbjct: 67  CRRLRNSNNMIPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAVLRRQVIE 126

Query: 123 SPAAVPADAWVLELGPRRLSP------PGFAPIALSEQDLTVLHELMRSAGEIASRQQIV 176
           +P A  A+  ++E G  RL+        G   + L+  +  VL  L+ +A E  SR +++
Sbjct: 127 APGAPSAEETIIEFGEFRLNLGTREMFRGEEAMPLTSGEFAVLKALVTNAREPLSRDKLM 186

Query: 177 QALGEHYLSYDQRRLDTQIRRLRRKVSEATGLALPINTARNAGYRF 222
                   S  +R +D QI RLRR +         I T    GY F
Sbjct: 187 NMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYVF 232