Pairwise Alignments

Query, 109 a.a., 4Fe-4S dicluster fused with DUF3470 from Variovorax sp. SCN45

Subject, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 49.3 bits (116), Expect = 5e-11
 Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 3/66 (4%)

Query: 5   VSEACIRCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPVNAIYAEEDLPAN 64
           V++ C+ C    CV  CPVD      ++ VID D+CI C VC   CP NAI+    LP  
Sbjct: 128 VTKDCVACGV--CVPECPVDAISI-EDIAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQK 184

Query: 65  QIAFIK 70
           +   IK
Sbjct: 185 RQKTIK 190



 Score = 37.7 bits (86), Expect = 1e-07
 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 4   VVSEACIRCKYTDCVDVCPVDCFR-EGPNMLVIDPDECIDCAVCIPECPVNAIYAE 58
           V  E CI C+   CV+ CP       G  + V  P+ C  C +C+  CPV  I  E
Sbjct: 194 VNEEECIGCE--KCVEACPGSMIEYNGEKLGVKLPEACPACGLCVESCPVEVISLE 247



 Score = 29.3 bits (64), Expect = 5e-05
 Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 7  EACIRCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPVNAIYAEEDLP 62
          + CI+C    C   CP     E    LV +  +C     C   CPV     ++  P
Sbjct: 32 KTCIQC--FSCATACPTGALVEKDGKLVFNGSKCDLDGACQKACPVGIKKVDDRFP 85



 Score = 28.5 bits (62), Expect = 9e-05
 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 18/62 (29%)

Query: 7   EACIRCKYTDCVDVCPVDCFR-------------EGPNMLVIDPDECIDCAVCIPECPVN 53
           EAC  C    CV+ CPV+                EG   LV   ++C  C  C  +CP  
Sbjct: 227 EACPACGL--CVESCPVEVISLEVEYASAKPVTDEG---LVWSEEKCAYCGPCAIKCPTG 281

Query: 54  AI 55
           AI
Sbjct: 282 AI 283



 Score = 25.8 bits (55), Expect = 6e-04
 Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 10/51 (19%)

Query: 9   CIRCKYTDCVDVCPVDCFREGPNM--------LVIDPDECIDCAVCIPECP 51
           CIRC    C   CP    + G  +        +   P  C +C  C+  CP
Sbjct: 308 CIRCGA--CAMKCPTGALKMGKMVHEGKEYARVEFSPALCNECGECVDVCP 356



 Score = 25.0 bits (53), Expect = 0.001
 Identities = 9/21 (42%), Positives = 10/21 (47%)

Query: 35 IDPDECIDCAVCIPECPVNAI 55
          I  D C+ C  C   CP  AI
Sbjct: 6  IQEDACLVCNACAKACPTEAI 26



 Score = 23.5 bits (49), Expect = 0.003
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query: 40  CIDCAVCIPECPVNAI 55
           CI C  C  +CP  A+
Sbjct: 308 CIRCGACAMKCPTGAL 323



 Score = 23.1 bits (48), Expect = 0.004
 Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 1/39 (2%)

Query: 17  CVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPVNAI 55
           C   CPV   ++  +        C+ C  C+  CP   I
Sbjct: 69  CQKACPVG-IKKVDDRFPYSKGHCVLCEKCVEICPAEII 106