Pairwise Alignments

Query, 229 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 79.7 bits (195), Expect = 4e-20
 Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 20/213 (9%)

Query: 7   VALVEDDTGMRQRIARVVDADPLLSLAFSASNATDILAWLNENPVDVLLVDLGLPDRPGL 66
           +ALV+D T +R   A++++ +  + +     +A      L +  VDV ++D+ +PD  GL
Sbjct: 4   IALVDDHTIVRSGFAQLLNLEQDIRVQGEYESAKAAFYALTQAEVDVAIIDISMPDENGL 63

Query: 67  QVISQCRTMQPACAVMVLSIFGDEANMVQAFEAGASGYLLKDGTETELATHIRHLRAGGS 126
            ++ + R   P    ++LSI+   + + +A +AGA GYL K    +EL + IR + +G  
Sbjct: 64  SLLERLRQHNPRFKAIILSIYDSASFVKKALDAGAQGYLSKRCGPSELVSAIRTVASG-- 121

Query: 127 PMSPVIARQLLRRWQARAGTAAPAKPAASSPFGGGSIRPERLSPREFEVLDLVSRGFTYV 186
                      RR+         + P  ++           L+ RE EV DL+ +G    
Sbjct: 122 -----------RRYLCADALVNLSNPDINNVLAD-------LTKREVEVFDLLVQGKEVK 163

Query: 187 EVGTQMGVSASTVQTHIRNIYGKLDVHNKSEAV 219
           E+   + +S  TV  H  NI  KL++ N  + +
Sbjct: 164 EIAQTLFLSHKTVHVHRANILSKLNLTNNVDVI 196