Pairwise Alignments

Query, 229 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 85.9 bits (211), Expect = 5e-22
 Identities = 55/213 (25%), Positives = 107/213 (50%), Gaps = 19/213 (8%)

Query: 6   QVALVEDDTGMRQRIARVVDADPLLSLAFSASNATDILAWLNENPVDVLLVDLGLPDRPG 65
           +V LV+D   MR+ I +++  +    +   A +  + +A  ++   D++L+DL +    G
Sbjct: 4   RVLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQPDLILLDLNMKGMSG 63

Query: 66  LQVISQCRTMQPACAVMVLSIFGDEANMVQAFEAGASGYLLKDGTETELATHIRHLRAGG 125
           L  ++  RT +    V++L++    A++    +AGA GYLLKD    +L   ++    G 
Sbjct: 64  LDTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQGE 123

Query: 126 SPMSPVIARQLLRRWQARAGTAAPAKPAASSPFGGGSIRPERLSPREFEVLDLVSRGFTY 185
              S  + R LL R               S+PF       E L+ RE +++  V++G+  
Sbjct: 124 KAFSESVERYLLNR------------EHTSNPF-------EALTEREMQIMSEVAKGYRN 164

Query: 186 VEVGTQMGVSASTVQTHIRNIYGKLDVHNKSEA 218
            ++  ++ +S STV+ H++++  KLDV +++ A
Sbjct: 165 RQIADRLFISESTVKVHMKSLLKKLDVPSRTAA 197