Pairwise Alignments

Query, 229 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 216 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 80.1 bits (196), Expect = 3e-20
 Identities = 57/233 (24%), Positives = 113/233 (48%), Gaps = 27/233 (11%)

Query: 1   MTPATQVALVEDDTGMRQRIARVVDADPLLSLAFSASNATDILAWLNENPVDVLLVDLGL 60
           M    +V +V+D   +       ++ +P + +  +ASN  + L  +  +  DV+L+D+ +
Sbjct: 5   MDKPIRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSM 64

Query: 61  PDRPGLQVISQCRTMQPACAVMVLSIFGDEANMVQAFEAGASGYLLKDGTETELATHIRH 120
           P   G++     +   P   V++L++  +   ++Q  +AGA GY+LK+ +  ++   I+ 
Sbjct: 65  PIMNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKT 124

Query: 121 LRAGG-----SPMSPVIARQLLRRWQARAGTAAPAKPAASSPFGGGSIRPERLSPREFEV 175
           +  G      S  S + ++++L              P A+        +P  LS RE  +
Sbjct: 125 VHQGATYFCESTTSTLFSQEIL--------------PVAN--------KPNPLSRREEAI 162

Query: 176 LDLVSRGFTYVEVGTQMGVSASTVQTHIRNIYGKLDVHNKSEAVFEARNLGWL 228
           L +V++G +  ++ T + +S  TV+TH +NI  KLD+H+ +E    A   G L
Sbjct: 163 LRMVAQGCSSKKIATLLNISYRTVETHRQNIKHKLDIHSTAELAQYALQHGLL 215