Pairwise Alignments

Query, 299 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 64.3 bits (155), Expect = 3e-15
 Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 19/258 (7%)

Query: 20  DAGPEARPFTE-LHEGYSVSYVRKGSFG-YRTRGHAYELVTGSVLVGRPGDEYVCTHDNH 77
           DA  E + F+   HEGY+V  + +G+   YRT G+        +LV    DE    H  H
Sbjct: 28  DAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDSIILVN--ADE---VHTGH 82

Query: 78  VCGDECLAFHLSPGFVDLIGGDSKTWRVG-GLPPLAQLVVIG-ELAQA------AAEGQG 129
              +   A+       +     +K      G P   Q VV   ELA          E   
Sbjct: 83  SAVEGGWAYKAMYPLPEQFATVAKEIGANTGAPYFPQAVVYDPELASQLRLVFETLEKST 142

Query: 130 DAGLDELGMWFASRFVEVVSGRRKSVPPSTAAARDRRRAVDAAMWIDANSPHDIDLDGAA 189
           +  L E  ++  +  V++++   ++ P +       R  +    ++D     D+ L+  A
Sbjct: 143 NRLLRETLIY--ASLVKLMTRHGRTAPQADQPLSALRPLLLVKEFLDDFPQADVSLEELA 200

Query: 190 AEAGLSSFHFLRLFSQVLGVTPHQYLVRSRLRRAARLLAEDDARPVTEISLDVGFADLSN 249
             AGLS FH +R F +  G+ PH Y +++RLR A  LL +  +  ++E + + GF D S+
Sbjct: 201 QLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVS--ISETAQECGFHDQSH 258

Query: 250 FVRTFHRAAGVSPSGFRK 267
             R F +A G++P  + +
Sbjct: 259 LHRHFKKALGITPKQYAR 276